RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 GREB1LQ9C091 1923 aaPredicted RBP5.55□□□□□ -1.52
KARSP3-201ENST00000571212 MYH4Q9Y623 1939 aa5.55□□□□□ -1.52
KARSP3-201ENST00000571212 VWA5AO00534 786 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 PRKAB2O43741 272 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 NRP2O60462 931 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 MBD4O95243 580 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ABHD16AO95870 558 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 TIMP1P01033 207 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 FGAP02671 866 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ITGB1P05556 798 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 PGK2P07205 417 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CYP2D6P10635 497 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 PROZP22891 400 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ACLYP53396 1101 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 NRG3P56975 720 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ATP13A4Q4VNC1 1196 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 C12orf60Q5U649 245 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 VPS53Q5VIR6 699 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 MROH7Q68CQ1 1323 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CTR9Q6PD62 1173 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CCDC174Q6PII3 467 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CCDC171Q6TFL3 1326 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CWC27Q6UX04 472 aaKnown RBP5.54□□□□□ -1.52
KARSP3-201ENST00000571212 C11orf74Q86VG3 221 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 GLB1L2Q8IW92 636 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 GLB1L3Q8NCI6 653 aaPredicted RBP5.54□□□□□ -1.52
KARSP3-201ENST00000571212 KLHDC9Q8NEP7 349 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 REPS2Q8NFH8 660 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 GBF1Q92538 1859 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 TIFAQ96CG3 184 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 DYNLL2Q96FJ2 89 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 TEX101Q9BY14 249 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 SLKQ9H2G2 1235 aaPredicted RBP5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ARMT1Q9H993 441 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 STARD7Q9NQZ5 370 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 TRPM5Q9NZQ8 1165 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 TBX21Q9UL17 535 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 CNPY2Q9Y2B0 182 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 HS3ST4Q9Y661 456 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 EYSQ5T1H1 3165 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 ELP1O95163 1332 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
KARSP3-201ENST00000571212 DUSP11O75319 330 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 RECQL4O94761 1208 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 LTA4HP09960 611 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 EEF2P13639 858 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CST5P28325 142 aaPredicted RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CDK7P50613 346 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 LGALS4P56470 323 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 APBA1Q02410 837 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PPIGQ13427 754 aaKnown RBP eCLIP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TIGD2Q4W5G0 525 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 AKNAD1Q5T1N1 836 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 KCNV1Q6PIU1 500 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 LRRC55Q6ZSA7 311 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 RASSF3Q86WH2 238 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 AMOTL1Q8IY63 956 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 USP38Q8NB14 1042 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PCSK9Q8NBP7 692 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 MDM1Q8TC05 714 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 RUFY2Q8WXA3 655 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 GLT1D1Q96MS3 346 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PDCD2LQ9BRP1 358 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 KCTD10Q9H3F6 313 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 FBXO28Q9NVF7 368 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 COL4A3Q01955 1670 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 VCANP13611 3396 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TCF20Q9UGU0 1960 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CENPVL1A0A0U1RR11 272 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 SMIM22K7EJ46 135 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 ATP2A1O14983 1001 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TRIM24O15164 1050 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 NCR1O76036 304 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 SNAI1O95863 264 aaPredicted RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PCP11498 1178 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 BMP5P22003 454 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 WNT3AP56704 352 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PTPAQ15257 358 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CCDC178Q5BJE1 867 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 LY6G5CQ5SRR4 150 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TMEM240Q5SV17 173 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 FAM83BQ5T0W9 1011 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 CCDC129Q6ZRS4 1044 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 DOK3Q7L591 496 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 GPRIN1Q7Z2K8 1008 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 FBXL16Q8N461 479 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TMEM199Q8N511 208 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 UBR7Q8N806 425 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 SECISBP2LQ93073 1101 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 SLF1Q9BQI6 1058 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TEX13BQ9BXU2 312 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 UPF3AQ9H1J1 476 aaKnown RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 PDCL3Q9H2J4 239 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 SPC25Q9HBM1 224 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 TOPORSQ9NS56 1045 aaPredicted RBP5.53□□□□□ -1.52
KARSP3-201ENST00000571212 DIAPH3Q9NSV4 1193 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 ANKFY1Q9P2R3 1169 aa5.53□□□□□ -1.52
KARSP3-201ENST00000571212 ARPP21Q9UBL0 812 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms