RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CHKBQ9Y259 395 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 SLC45A1Q9Y2W3 748 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 DNAH12Q6ZR08 3092 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 IL4RP24394 825 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 TARSP26639 723 aaKnown RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 RBL1P28749 1068 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 MSH2P43246 934 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 PDK4Q16654 411 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 KBTBD12Q3ZCT8 623 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 DUSP28Q4G0W2 176 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 TTC30AQ86WT1 665 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 C7orf31Q8N865 590 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 MZB1Q8WU39 189 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 ZNF75CPQ92670 426 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 FAF2Q96CS3 445 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 FAM49AQ9H0Q0 323 aaPredicted RBP12.01□□□□□ -0.49
C11orf54-214ENST00000540113 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 ACSS3Q9H6R3 686 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 RSAD1Q9HA92 442 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 CDHR5Q9HBB8 845 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 NPHS2Q9NP85 383 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 RAB6BQ9NRW1 208 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 SNTG2Q9NY99 539 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 TUBGCP4Q9UGJ1 667 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 ITGA11Q9UKX5 1188 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 EFR3BQ9Y2G0 817 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 C2CD2Q9Y426 696 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 NUMBLQ9Y6R0 609 aa12.01□□□□□ -0.49
C11orf54-214ENST00000540113 STRNO43815 780 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 EDF1O60869 148 aaKnown RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 PHBP35232 272 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 FKBP1BP68106 108 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 NOMO1Q15155 1222 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 ACCSLQ4AC99 568 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 RNF43Q68DV7 783 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 ZNF449Q6P9G9 518 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 ADGRD1Q6QNK2 874 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 OR6J1Q8NGC5 347 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 NPLOC4Q8TAT6 608 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 FAM172AQ8WUF8 416 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 SERAC1Q96JX3 654 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 CNPY3Q9BT09 278 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 NT5C1AQ9BXI3 368 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 ETNK1Q9HBU6 452 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 SETD4Q9NVD3 440 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 HAO1Q9UJM8 370 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 DCTN4Q9UJW0 460 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 GJD2Q9UKL4 321 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 SMG5Q9UPR3 1016 aaKnown RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 TCRBV9S1A1TA0A576 114 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 E7ESA3 106 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 PDGFRBP09619 1106 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 P4HA1P13674 534 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 HOXA11P31270 313 aaPredicted RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 GRM5P41594 1212 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 GTF2A2P52657 109 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 RBP5P82980 135 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 FAAP100Q0VG06 881 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 LCLAT1Q6UWP7 414 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 ANKRD23Q86SG2 305 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 DPP9Q86TI2 863 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 PQLC3Q8N755 202 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 PLD5Q8N7P1 536 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 PTPRN2Q92932 1015 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 RNF157Q96PX1 679 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 PTPN18Q99952 460 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 ADAMTS10Q9H324 1103 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 USP29Q9HBJ7 922 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 GBA2Q9HCG7 927 aaPredicted RBP12□□□□□ -0.49
C11orf54-214ENST00000540113 STARD13Q9Y3M8 1113 aa12□□□□□ -0.49
C11orf54-214ENST00000540113 STAU1O95793 577 aaKnown RBP11.99□□□□□ -0.49
C11orf54-214ENST00000540113 PTK7Q13308 1070 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 ACVR2BQ13705 512 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 SEPT7Q16181 437 aaKnown RBP11.99□□□□□ -0.49
C11orf54-214ENST00000540113 KYAT1Q16773 422 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 PLEKHG4Q58EX7 1191 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 VSIG1Q86XK7 387 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 CCDC110Q8TBZ0 833 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 AGAP11Q8TF27 550 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.499e-10■■■■□ 24.3
C11orf54-214ENST00000540113 STAMBPL1Q96FJ0 436 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 TINF2Q9BSI4 451 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 SNRNP25Q9BV90 132 aaKnown RBP11.99□□□□□ -0.49
C11orf54-214ENST00000540113 RRAGCQ9HB90 399 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 MFHAS1Q9Y4C4 1052 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 CFAP73A6NFT4 308 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 UGT1A9O60656 530 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 ENDOD1O94919 500 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 CBX6O95503 412 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 AKAP5P24588 427 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 ADORA2BP29275 332 aa11.99□□□□□ -0.49
C11orf54-214ENST00000540113 GBP2P32456 591 aaPredicted RBP11.99□□□□□ -0.49
C11orf54-214ENST00000540113 PCK1P35558 622 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms