RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PPP2R3CQ969Q6 453 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 WBP2Q969T9 261 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MIB2Q96AX9 1013 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 CTHRC1Q96CG8 243 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 FAXDC2Q96IV6 333 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 C17orf80Q9BSJ5 609 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SCNM1Q9BWG6 230 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SF3B5Q9BWJ5 86 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 RBM38Q9H0Z9 239 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 RMI1Q9H9A7 625 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 FZD3Q9NPG1 666 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 CD93Q9NPY3 652 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 SNX15Q9NRS6 342 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PNPOQ9NVS9 261 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 TMEM45AQ9NWC5 275 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 HIF1ANQ9NWT6 349 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 LPAR3Q9UBY5 353 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 COG5Q9UP83 839 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 USP22Q9UPT9 525 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 PCDHA1Q9Y5I3 950 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MMP24Q9Y5R2 645 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MRFAP1Q9Y605 127 aa1.1□□□□□ -2.23
COPB1-212ENST00000534771 MRPL42Q9Y6G3 142 aaKnown RBP1.1□□□□□ -2.23
COPB1-212ENST00000534771 KRTAP4-16G5E9R7 235 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 M0R3H8 397 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 MYO1CO00159 1063 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 INPPL1O15357 1258 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PRPF4O43172 522 aaKnown RBP eCLIP1.09□□□□□ -2.236e-8■■■■■ 28.1
COPB1-212ENST00000534771 XPOTO43592 962 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 TLX3O43711 291 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 TMPRSS11DO60235 418 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 UNC5CO95185 931 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 THP07101 528 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 GRPP07492 148 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 ACAA1P09110 424 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 HOXC6P09630 235 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PKMP14618 531 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 HOXB2P14652 356 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 TYRP14679 529 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 CREB1P16220 341 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 HDCP19113 662 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 KCNA3P22001 575 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 TCEA1P23193 301 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 HOXA11P31270 313 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 PRKAR1BP31321 381 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 CXCR3P49682 368 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 DIO1P49895 249 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 YPEL5P62699 121 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 KRT17Q04695 432 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 EGR4Q05215 589 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 EXOSC9Q06265 439 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 NOGQ13253 232 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 SLC14A1Q13336 389 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 CCNIQ14094 377 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PTGR1Q14914 329 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 SF3B4Q15427 424 aaKnown RBP eCLIP1.09□□□□□ -2.233e-7■■■■■ 61.5
COPB1-212ENST00000534771 MRGPRG-AS1Q2M3A8 158 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 SLC4A8Q2Y0W8 1093 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 UAP1L1Q3KQV9 507 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 EMC10Q5UCC4 262 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 ZNF793Q6ZN11 406 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 LHFPL2Q6ZUX7 228 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 TRILQ7L0X0 811 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 TRAPPC11Q7Z392 1133 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 HEATR3Q7Z4Q2 680 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 LINC01465Q8N7H1 131 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 NGDNQ8NEJ9 315 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 BRIX1Q8TDN6 353 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 ELP5Q8TE02 316 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 COG1Q8WTW3 980 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 OIT3Q8WWZ8 545 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 SREK1Q8WXA9 508 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 UBXN4Q92575 508 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 TRMT61AQ96FX7 289 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 FAM167AQ96KS9 214 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 MESP1Q9BRJ9 268 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 CDT1Q9H211 546 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 C6orf106Q9H6K1 298 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 CXorf36Q9H7Y0 433 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 GBA2Q9HCG7 927 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 ZSCAN32Q9NX65 697 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PLK2Q9NYY3 685 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 FEZ2Q9UHY8 353 aaPredicted RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 ANAPC4Q9UJX5 808 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PCDHA12Q9UN75 941 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 DRG1Q9Y295 367 aaKnown RBP1.09□□□□□ -2.23
COPB1-212ENST00000534771 TMX2Q9Y320 296 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 SNX14Q9Y5W7 946 aa1.09□□□□□ -2.23
COPB1-212ENST00000534771 PHLDB1Q86UU1 1377 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 A0A1W2PNU3 283 aaPredicted RBP1.08□□□□□ -2.24
COPB1-212ENST00000534771 A0A1W2PPC1 479 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 C2CD4BA6NLJ0 364 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 H3BUI4 141 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PODXLO00592 558 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 FYB1O15117 783 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 AKAP10O43572 662 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PCDHGA12O60330 932 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 PLAUP00749 431 aa1.08□□□□□ -2.24
COPB1-212ENST00000534771 FTLP02792 175 aaPredicted RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms