RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	CDR2L	Q86X02	465 aa	Predicted RBP	4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	LRRC6	Q86X45	466 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	C2CD5	Q86YS7	1000 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	RTKN2	Q8IZC4	609 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	MARVELD2	Q8N4S9	558 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	SRBD1	Q8N5C6	995 aa	Known RBP	4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	SLC15A4	Q8N697	577 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	TSPYL6	Q8N831	410 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	ZNF366	Q8N895	744 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	PI4K2B	Q8TCG2	481 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	TGFBRAP1	Q8WUH2	860 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	SCFD1	Q8WVM8	642 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	AKAP1	Q92667	903 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	TGS1	Q96RS0	853 aa	Known RBP	4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	CDRT15	Q96T59	188 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	YME1L1	Q96TA2	773 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	CLSTN3	Q9BQT9	956 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	SLC6A17	Q9H1V8	727 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	PRDM11	Q9NQV5	511 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	MAT2B	Q9NZL9	334 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	APPL1	Q9UKG1	709 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	KCNH3	Q9ULD8	1083 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	PCDHGB4	Q9UN71	923 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	ERVK-19	Q9WJR5	959 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	NEU2	Q9Y3R4	380 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	PCDHGB5	Q9Y5G0	923 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	MAU2	Q9Y6X3	613 aa		4.82	□□□□□ -1.64
PCM1-215	ENST00000522275	MYOM1	P52179	1685 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CDK12	Q9NYV4	1490 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	MYOCOS	A0A1B0GUC4	107 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	C16orf96	A6NNT2	1141 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	C12orf71	A8MTZ7	269 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PSMD12	O00232	456 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PLK4	O00444	970 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	DENR	O43583	198 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CCNT2	O60583	730 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	USP12	O75317	370 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	FKBP6	O75344	327 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	MAF	O75444	373 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	MOCS3	O95396	460 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	SNAP29	O95721	258 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	TP53	P04637	393 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CYP17A1	P05093	508 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PLEK	P08567	350 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	KRT3	P12035	628 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	HOXB3	P14651	431 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CYP3A7	P24462	503 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PML	P29590	882 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ACSL1	P33121	698 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	IDUA	P35475	653 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ATP5O	P48047	213 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	HIRA	P54198	1017 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	NCKAP1L	P55160	1127 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	EIF4A1	P60842	406 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	GPLD1	P80108	840 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	XIAP	P98170	497 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CYP27A1	Q02318	531 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	GCNT1	Q02742	428 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	TRIM14	Q14142	442 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	TLR1	Q15399	786 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	SKIV2L	Q15477	1246 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	TAF5	Q15542	800 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	KYNU	Q16719	465 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PGS1	Q32NB8	556 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	LRIT3	Q3SXY7	679 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	AARS2	Q5JTZ9	985 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ATF7IP2	Q5U623	682 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	LPCAT4	Q643R3	524 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	SCARA3	Q6AZY7	606 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	WDR59	Q6PJI9	974 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	BLOC1S2	Q6QNY1	142 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	C15orf52	Q6ZUT6	534 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	TPH2	Q8IWU9	490 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	BBS7	Q8IWZ6	715 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CPNE9	Q8IYJ1	553 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	AHI1	Q8N157	1196 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	SLC4A11	Q8NBS3	891 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ICA1L	Q8NDH6	482 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	OR6C4	Q8NGE1	309 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CKAP2	Q8WWK9	683 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PIK3R3	Q92569	461 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ESR2	Q92731	530 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	RPRD1A	Q96P16	312 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CINP	Q9BW66	212 aa	Predicted RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CDADC1	Q9BWV3	514 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	NT5C3A	Q9H0P0	336 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	NOL6	Q9H6R4	1146 aa	Known RBP	4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ZNF696	Q9H7X3	374 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	CRLF2	Q9HC73	371 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	MLXIPL	Q9NP71	852 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	SAR1A	Q9NR31	198 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	KL	Q9UEF7	1012 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	EBF1	Q9UH73	591 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	PPM1H	Q9ULR3	514 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	RFX7	Q2KHR2	1363 aa		4.81	□□□□□ -1.64
PCM1-215	ENST00000522275	ABCC10	Q5T3U5	1492 aa		4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms