RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SMAPO00193 183 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 ASMTLO95671 621 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 CHRNA1P02708 482 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 TSHRP16473 764 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 CHKAP35790 457 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 MGAT3Q09327 533 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 KLF1Q13351 362 aaPredicted RBP19.11■□□□□ 0.65
SDC2-202ENST00000518385 LRRC14Q15048 493 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 PDK4Q16654 411 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 KYNUQ16719 465 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 XKR4Q5GH76 650 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 PPP1R15BQ5SWA1 713 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 CAPRIN2Q6IMN6 1127 aaKnown RBP19.11■□□□□ 0.65
SDC2-202ENST00000518385 TRABD2AQ86V40 505 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 VSIG1Q86XK7 387 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 ECHDC2Q86YB7 292 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 FNIP1Q8TF40 1166 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 THOC1Q96FV9 657 aaKnown RBP19.11■□□□□ 0.65
SDC2-202ENST00000518385 DEFB118Q96PH6 123 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 LRRC37BQ96QE4 947 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 SMYD3Q9H7B4 428 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 TLE6Q9H808 572 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 ETNK1Q9HBU6 452 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 TRMT13Q9NUP7 481 aaKnown RBP19.11■□□□□ 0.65
SDC2-202ENST00000518385 SNTG2Q9NY99 539 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 LNPEPQ9UIQ6 1025 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 OGDHLQ9ULD0 1010 aa19.11■□□□□ 0.65
SDC2-202ENST00000518385 CCDC189A1A4V9 331 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 SIGLEC16A6NMB1 481 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 RASA4BC9J798 803 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 RASA4O43374 803 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 NEBLO76041 1014 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 CYP3A5P20815 502 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 CDH8P55286 799 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 TSNAXIP1Q2TAA8 658 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 SLC45A4Q5BKX6 768 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 DCUN1D2Q6PH85 259 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 DENND1AQ8TEH3 1009 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 ZNF570Q96NI8 536 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 NT5C1AQ9BXI3 368 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 FRMD8P1Q9BZ68 369 aaPredicted RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 SENP6Q9GZR1 1112 aaPredicted RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 ELOVL4Q9GZR5 314 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.1■□□□□ 0.65
SDC2-202ENST00000518385 DRG1Q9Y295 367 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 L3MBTL1Q9Y468 752 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 ARVCFO00192 962 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 KCNE1P15382 129 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 PTPN7P35236 360 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 PNPLA4P41247 253 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 MAGEA4P43358 317 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 RAP1GAPP47736 663 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 GABRB2P47870 512 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 TRIM71Q2Q1W2 868 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 IZUMO3Q5VZ72 239 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 DENND1BQ6P3S1 775 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 FBXO46Q6PJ61 603 aaPredicted RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 UNC93AQ86WB7 457 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 RCOR2Q8IZ40 523 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 STK32AQ8WU08 396 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 C1orf54Q8WWF1 131 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 ALKBH8Q96BT7 664 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 NAF1Q96HR8 494 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 RBM41Q96IZ5 413 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 SMC6Q96SB8 1091 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 EIF2AQ9BY44 585 aaKnown RBP19.1■□□□□ 0.65
SDC2-202ENST00000518385 NOD1Q9Y239 953 aa19.1■□□□□ 0.65
SDC2-202ENST00000518385 A6NHS1 94 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 ZWINTO95229 277 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 MYCP01106 439 aaPredicted RBP19.09■□□□□ 0.65
SDC2-202ENST00000518385 GNAZP19086 355 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 THPOP40225 353 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 SNX16P57768 344 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 LBRQ14739 615 aaKnown RBP19.09■□□□□ 0.65
SDC2-202ENST00000518385 MORF4L2Q15014 288 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 ACAP1Q15027 740 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 TAF11Q15544 211 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 FAM26DQ5JW98 314 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 FYB2Q5VWT5 728 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 CGB2Q6NT52 195 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 LCLAT1Q6UWP7 414 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 PCGF5Q86SE9 256 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.09■□□□□ 0.65
SDC2-202ENST00000518385 RMDN2Q96LZ7 410 aa19.09■□□□□ 0.65
SDC2-202ENST00000518385 DDX56Q9NY93 547 aaKnown RBP19.09■□□□□ 0.65
SDC2-202ENST00000518385 PIN4Q9Y237 131 aaKnown RBP19.09■□□□□ 0.65
SDC2-202ENST00000518385 EDF1O60869 148 aaKnown RBP19.08■□□□□ 0.65
SDC2-202ENST00000518385 RECQL4O94761 1208 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 FAM163BP0C2L3 166 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 SETSIPP0DME0 302 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 ACADSP16219 412 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 KLRC2P26717 231 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 CDK7P50613 346 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 MPP2Q14168 576 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 PKN2Q16513 984 aaKnown RBP19.08■□□□□ 0.65
SDC2-202ENST00000518385 C2CD6Q53TS8 623 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 SRRM1Q8IYB3 904 aaKnown RBP19.08■□□□□ 0.65
SDC2-202ENST00000518385 LRRC8CQ8TDW0 803 aa19.08■□□□□ 0.65
SDC2-202ENST00000518385 HEXIM2Q96MH2 286 aaKnown RBP19.08■□□□□ 0.65
SDC2-202ENST00000518385 ZNF560Q96MR9 790 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms