RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 PASD1Q8IV76 773 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 VSTM4Q8IW00 320 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 DEPDC1BQ8WUY9 529 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 SYN2Q92777 582 aaPredicted RBP16.8■□□□□ 0.28
SSBP1-214ENST00000498107 FGF14Q92915 247 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 PPP1R13BQ96KQ4 1090 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 TRIM62Q9BVG3 475 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 SYNCQ9H7C4 482 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 TDP1Q9NUW8 608 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 NAGPAQ9UK23 515 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 SORCS3Q9UPU3 1222 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 NUMBLQ9Y6R0 609 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 C5orf42Q9H799 3197 aa16.8■□□□□ 0.28
SSBP1-214ENST00000498107 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 A0A1W2PQH9 124 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 C2orf78A6NCI8 922 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 TLR5O60602 858 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 MMEP08473 750 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 CFHP08603 1231 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSBP1-214ENST00000498107 SLC7A9P82251 487 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 TDGQ13569 410 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 BTBD8Q5XKL5 378 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 TANGO2Q6ICL3 276 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 PPP1R2P3Q6NXS1 205 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 KLHDC10Q6PID8 442 aa16.79■□□□□ 0.28
SSBP1-214ENST00000498107 DDX42Q86XP3 938 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSBP1-214ENST00000498107 ARL14EPQ8N8R7 260 aaPredicted RBP16.79■□□□□ 0.28
SSBP1-214ENST00000498107 C1orf131Q8NDD1 294 aaKnown RBP16.79■□□□□ 0.28
SSBP1-214ENST00000498107 BZW2Q9Y6E2 419 aaKnown RBP16.79■□□□□ 0.28
SSBP1-214ENST00000498107 OLFM2O95897 454 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ASGR2P07307 311 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 RARGP13631 454 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 PSMC3P17980 439 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 FCARP24071 287 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
SSBP1-214ENST00000498107 PRKCIP41743 596 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 DAOAP59103 153 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 FMO1Q01740 532 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 KLHL30Q0D2K2 578 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 TSR1Q2NL82 804 aaKnown RBP16.78■□□□□ 0.28
SSBP1-214ENST00000498107 POTEHQ6S545 545 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 IRF2BP2Q7Z5L9 587 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ZDHHC17Q8IUH5 632 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 MFSD6LQ8IWD5 586 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 YAF2Q8IY57 180 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 UBALD2Q8IYN6 164 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 SLC44A3Q8N4M1 653 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 WDTC1Q8N5D0 677 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 SLC20A1Q8WUM9 679 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 CPLX3Q8WVH0 158 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 MRFAP1L1Q96HT8 127 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 AGPAT1Q99943 283 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 KXD1Q9BQD3 176 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 CD320Q9NPF0 282 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ABCC13Q9NSE7 274 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 OLA1Q9NTK5 396 aaKnown RBP16.78■□□□□ 0.28
SSBP1-214ENST00000498107 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.78■□□□□ 0.28
SSBP1-214ENST00000498107 THG1LQ9NWX6 298 aaKnown RBP16.78■□□□□ 0.28
SSBP1-214ENST00000498107 ARHGAP26Q9UNA1 814 aa16.78■□□□□ 0.28
SSBP1-214ENST00000498107 HEPACAM2A8MVW5 462 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 E5RJQ4 531 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 CYP1A1P04798 512 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 GYPCP04921 128 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 MBL2P11226 248 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 ALADP13716 330 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 TCF3P15923 654 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 CASP14P31944 242 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 VIPR2P41587 438 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 GOLGA8FQ08AF8 430 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 GOLGA8DPQ0D2H9 430 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 TOGARAM2Q6ZUX3 1019 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 SCD5Q86SK9 330 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 SCUBE3Q8IX30 993 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 KIAA1958Q8N8K9 716 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 RNF139Q8WU17 664 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 USP13Q92995 863 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 CYP2S1Q96SQ9 504 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 TRMT61BQ9BVS5 477 aaKnown RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 CCSER2Q9H7U1 834 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 NMUR1Q9HB89 426 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 SEPT11Q9NVA2 429 aaKnown RBP16.77■□□□□ 0.28
SSBP1-214ENST00000498107 CYTH4Q9UIA0 394 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
SSBP1-214ENST00000498107 BDP1A6H8Y1 2624 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 PIK3R2O00459 728 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 COCHO43405 550 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 PRAMEF12O95522 483 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 LTFP02788 710 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 GLI1P08151 1106 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 CHRNB2P17787 502 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 TNFAIP3P21580 790 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 NSFP46459 744 aaKnown RBP16.76■□□□□ 0.27
SSBP1-214ENST00000498107 ZNF75DP51815 510 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 NOMO3P69849 1222 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 PFKPQ01813 784 aa16.76■□□□□ 0.27
SSBP1-214ENST00000498107 EFHC1Q5JVL4 640 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms