RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	PAFAH1B1	P43034	410 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	CACNA2D1	P54289	1103 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	RNASE9	P60153	205 aa	Known RBP	19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	TFF2	Q03403	129 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	PTPRO	Q16827	1216 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	PM20D1	Q6GTS8	502 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	KLHL23	Q8NBE8	558 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	MNS1	Q8NEH6	495 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	JOSD2	Q8TAC2	188 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	ZNF461	Q8TAF7	563 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	HLA-C	Q95604	372 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	TRIM7	Q9C029	511 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	FBXO44	Q9H4M3	255 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	AFF4	Q9UHB7	1163 aa	Known RBP	19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	USP3	Q9Y6I4	520 aa		19.35	■□□□□ 0.69
PNCK-231	ENST00000488994	GJB6	O95452	261 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CTSA	P10619	480 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CTNNB1	P35222	781 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	DAOA	P59103	153 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	TUBB4B	P68371	445 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ROR1	Q01973	937 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	UBE3A	Q05086	875 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ADCY1	Q08828	1119 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CAMK1	Q14012	370 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	HADH	Q16836	314 aa	Known RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CC2D1A	Q6P1N0	951 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RSPO2	Q6UXX9	243 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	BEND5	Q7L4P6	421 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	SCN4B	Q8IWT1	228 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	NUP93	Q8N1F7	819 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ADAMTS19	Q8TE59	1207 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RXFP2	Q8WXD0	754 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	SPATA17	Q96L03	361 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RHOBTB2	Q9BYZ6	727 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ULBP1	Q9BZM6	244 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	TMEM51	Q9NW97	253 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RRN3	Q9NYV6	651 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	19.34	■□□□□ 0.69	2e-7	■■■■□ 26
PNCK-231	ENST00000488994	EHD2	Q9NZN4	543 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	PACSIN2	Q9UNF0	486 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	C2CD2L	O14523	706 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ABLIM3	O94929	683 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RTN3	O95197	1032 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	HAPLN1	P10915	354 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	DNAJB1	P25685	340 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	PCK1	P35558	622 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	MATK	P42679	507 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	PTPN9	P43378	593 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RWDD2B	P57060	319 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RAB33A	Q14088	237 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CCDC181	Q5TID7	509 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RNF19B	Q6ZMZ0	732 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	EMC1	Q8N766	993 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	ATAD1	Q8NBU5	361 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	SPPL3	Q8TCT6	385 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	KHSRP	Q92945	711 aa	Known RBP eCLIP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RPGRIP1	Q96KN7	1286 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	PGLYRP2	Q96PD5	576 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	CLSTN3	Q9BQT9	956 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	C11orf84	Q9BUA3	381 aa	Predicted RBP	19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	POPDC2	Q9HBU9	364 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	RXFP1	Q9HBX9	757 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	TMEM30A	Q9NV96	361 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	UST	Q9Y2C2	406 aa		19.34	■□□□□ 0.69
PNCK-231	ENST00000488994	MYH10	P35580	1976 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	TNFRSF10B	O14763	440 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	GRM6	O15303	877 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	DDX3Y	O15523	660 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	DAB1	O75553	588 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	SLU7	O95391	586 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	KRT7	P08729	469 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	NOS2	P35228	1153 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	SSR1	P43307	286 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	NDUFV1	P49821	464 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	PEX5	P50542	639 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	OGDH	Q02218	1023 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	ZNF252P-AS1	Q0IIN9	211 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	GPM6B	Q13491	265 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	SKIV2L	Q15477	1246 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	MGAT5B	Q3V5L5	792 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	POLN	Q7Z5Q5	900 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	ARHGAP18	Q8N392	663 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	FAM149B1	Q96BN6	582 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	NAP1L3	Q99457	506 aa	Predicted RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	DDX23	Q9BUQ8	820 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	LMAN2L	Q9H0V9	348 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	ZBP1	Q9H171	429 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	ALG13	Q9NP73	1137 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	DDX56	Q9NY93	547 aa	Known RBP	19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	STAP1	Q9ULZ2	295 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	VWA8	A3KMH1	1905 aa		19.33	■□□□□ 0.68
PNCK-231	ENST00000488994	WDR27	A2RRH5	827 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	CAPN9	O14815	690 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	LILRB3	O75022	631 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	SRGAP2	O75044	1071 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	USP17L7	P0C7H9	530 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	ATF2	P15336	505 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	FLT3	P36888	993 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	CETN2	P41208	172 aa		19.32	■□□□□ 0.68
PNCK-231	ENST00000488994	SLC5A3	P53794	718 aa		19.32	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms