RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C20orf96Q9NUD7 363 aaPredicted RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 UBR1Q8IWV7 1749 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 XPO1O14980 1071 aaKnown RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TPD52L2O43399 206 aaKnown RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ZNF862O60290 1169 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 GGPS1O95749 300 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 RGS4P49798 205 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ALDH18A1P54886 795 aaKnown RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 ZNF544Q6NX49 715 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TTC33Q6PID6 262 aaPredicted RBP11.9□□□□□ -0.5
U2AF1-209ENST00000475639 CYFIP1Q7L576 1253 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 GALNT4Q8N4A0 578 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 KRT35Q92764 455 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 PNMA5Q96PV4 448 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 PIGSQ96S52 555 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 CAAP1Q9H8G2 361 aa11.9□□□□□ -0.5
U2AF1-209ENST00000475639 TK2O00142 265 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 MOCS2O96007 188 aaPredicted RBP11.9□□□□□ -0.51
U2AF1-209ENST00000475639 CD97P48960 835 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 OXCT1P55809 520 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.9□□□□□ -0.51
U2AF1-209ENST00000475639 SYDE2Q5VT97 1194 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 CCDC81Q6ZN84 652 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.51
U2AF1-209ENST00000475639 IRGQQ8WZA9 623 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 GREM2Q9H772 168 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 KRT84Q9NSB2 600 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 KANSL3Q9P2N6 904 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 NCANO14594 1321 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 KIF13AQ9H1H9 1805 aa11.9□□□□□ -0.51
U2AF1-209ENST00000475639 SRP72O76094 671 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 EIF2AK2P19525 551 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PHKA2P46019 1235 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 GCLMP48507 274 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 CDH6P55285 790 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 KCNQ4P56696 695 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SESN2P58004 480 aaPredicted RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 RPS6P62753 249 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 BTKQ06187 659 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 C11orf88Q6PI97 169 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 OTOAQ7RTW8 1153 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ADGRA1Q86SQ6 560 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 DENND1AQ8TEH3 1009 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PPP2R3CQ969Q6 453 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ARHGEF26Q96DR7 871 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 NPHS2Q9NP85 383 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TAS2R1Q9NYW7 299 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ALS2Q96Q42 1657 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SMIM31A0A1B0GVY4 71 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 VILLO15195 856 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TCEA3O75764 348 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ANPEPP15144 967 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 CENPAP49450 140 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 NCF4Q15080 339 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SLC15A3Q8IY34 581 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 AFG1LQ8WV93 481 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 KCNN1Q92952 543 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 COA7Q96BR5 231 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 RNFT2Q96EX2 444 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 DDX18Q9NVP1 670 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 EURLQ9NYK6 297 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PLCH1Q4KWH8 1693 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 CAMTA1Q9Y6Y1 1673 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ZNF839A8K0R7 811 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 CYTH3O43739 400 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 NDUFS3O75489 264 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 KLHL18O94889 574 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PON1P27169 355 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SERPINB9P50453 376 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PDK4Q16654 411 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 HEATR4Q86WZ0 1026 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 FAM45AQ8TCE6 357 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 GAB3Q8WWW8 586 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PRR11Q96HE9 360 aaPredicted RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 CNDP1Q96KN2 507 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PPCSQ9HAB8 311 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PRDM16Q9HAZ2 1276 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 COG5Q9UP83 839 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ACTL7BQ9Y614 415 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 BAZ2AQ9UIF9 1905 aaKnown RBP11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SUPT3HB4E1H0 165 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SNAP23O00161 211 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 AIM2O14862 343 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 TRIM13O60858 407 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 SOX6P35712 828 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 EVX2Q03828 476 aa11.89□□□□□ -0.51
U2AF1-209ENST00000475639 ADRM1Q16186 407 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms