RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 CLGNO14967 610 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CYP2F1P24903 491 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CASP2P42575 452 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 KCNJ1P48048 391 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ARHGDIAP52565 204 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PHEXP78562 749 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 C16orf89Q6UX73 402 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 AENQ8WTP8 325 aaKnown RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 C18orf25Q96B23 403 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ULK4Q96C45 1275 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 DCLK3Q9C098 648 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CCR1P32246 355 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 SLC6A3Q01959 620 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TSHZ1Q6ZSZ6 1077 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TMC3Q7Z5M5 1100 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 FAM167BQ9BTA0 163 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 FIS1Q9Y3D6 152 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 MYO1CO00159 1063 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TAL1P17542 331 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CNGA2Q16280 664 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 NLRP9Q7RTR0 991 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 LRRC52Q8N7C0 313 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PRDM5Q9NQX1 630 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PDGFCQ9NRA1 345 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 M0R2N6 131 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 DNAJC6O75061 913 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 MYO1DO94832 1006 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ITGAVP06756 1048 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TTC23LQ6PF05 361 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 FOPNLQ96NB1 174 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 C10orf71Q711Q0 1435 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 SMIM35A0A1B0GVV1 85 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ZBTB39O15060 712 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 IRAK1P51617 712 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CREMQ03060 361 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 AGAP9Q5VTM2 703 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PABPC5Q96DU9 382 aaKnown RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 AGAP3Q96P47 875 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 CDYLQ9Y232 598 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 APOC4-APOC2K7ER74 178 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 APOC2P02655 101 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 GFAPP14136 432 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 PPP3CAQ08209 521 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 C1orf146Q5VVC0 180 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 NOP9Q86U38 636 aaKnown RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ZCCHC17Q9NP64 241 aaKnown RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 XPNPEP3Q9NQH7 507 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 UBA6A0AVT1 1052 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 SPDYE5A6NIY4 337 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 ZBBXA8MT70 800 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 LRG1P02750 347 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 POLD3Q15054 466 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TNIP2Q8NFZ5 429 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 LBHD1Q9BQE6 289 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 UBXN6Q9BZV1 441 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 DDX43Q9NXZ2 648 aaKnown RBP11.95□□□□□ -0.5
PTCH1-208ENST00000430669 RAD54BQ9Y620 910 aa11.95□□□□□ -0.5
PTCH1-208ENST00000430669 TRDMT1O14717 391 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MRPS6P82932 125 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ADIGQ0VDE8 80 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MAMLD1Q13495 774 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ANO5Q75V66 913 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SHC3Q92529 594 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 NPHS2Q9NP85 383 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 PRKAA2P54646 552 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ST8SIA6P61647 398 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 KYNUQ16719 465 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ZACNQ401N2 412 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 PARP9Q8IXQ6 854 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 PDZD8Q8NEN9 1154 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 CAMKK2Q96RR4 588 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 VAT1Q99536 393 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ADGRE3Q9BY15 652 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 FGF10O15520 208 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 B4GALT4O60513 344 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 GLRA3O75311 464 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 KCNA2P16389 499 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ACCSLQ4AC99 568 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 LVRNQ6Q4G3 990 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 LRRC39Q96DD0 335 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 C9orf72Q96LT7 481 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SERPINB11Q96P15 392 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 FHDC1Q9C0D6 1143 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 LHX5Q9H2C1 402 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 PCDHAC2Q9Y5I4 1007 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 NEMP1O14524 444 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MAP3K7CLP57077 242 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MLXIPLQ9NP71 852 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 MAFBQ9Y5Q3 323 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 ASTN2O75129 1339 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-208ENST00000430669 SMIM22K7EJ46 135 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 O00370 1275 aa11.94□□□□□ -0.5
PTCH1-208ENST00000430669 RECQL4O94761 1208 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms