RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ATG4CQ96DT6 458 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 ZDHHC6Q9H6R6 413 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 GPR182O15218 404 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 DPEP1P16444 411 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TPH1P17752 444 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 PDHA2P29803 388 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TTC39CQ8N584 583 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TRIT1Q9H3H1 467 aaKnown RBP19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TFR2Q9UP52 801 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 C9orf131Q5VYM1 1079 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 MTMR12Q9C0I1 747 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 CNGB3Q9NQW8 809 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 APEX2Q9UBZ4 518 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 KLHL3Q9UH77 587 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 CCDC130P13994 396 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TAL1P17542 331 aaPredicted RBP19.05■□□□□ 0.64
SHANK3-202ENST00000414786 ZNHIT2Q9UHR6 403 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 EFR3BQ9Y2G0 817 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
SHANK3-202ENST00000414786 TP73O15350 636 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 MAPK11Q15759 364 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 C12orf60Q5U649 245 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 CASP10Q92851 521 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 USP13Q92995 863 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 SATB2Q9UPW6 733 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ANXA11P50995 505 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 PIGHQ14442 188 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ARSJQ5FYB0 599 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 FAM228AQ86W67 206 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 VAV1P15498 845 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 SEC16BQ96JE7 1060 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 DEFB129Q9H1M3 183 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ABCG8Q9H221 673 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 GBA2Q9HCG7 927 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 CHKBQ9Y259 395 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 SNUPNO95149 360 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 EPHA10Q5JZY3 1008 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ADGRF2Q8IZF7 708 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 DSELQ8IZU8 1212 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 OR10G6Q8NH81 332 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ADAM32Q8TC27 787 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 EYA4O95677 639 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 TARSP26639 723 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 TMED10P49755 219 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 AP3M2P53677 418 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 SRP54P61011 504 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 IL5RAQ01344 420 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 OTUD4Q01804 1114 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 RMND5AQ9H871 391 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 POLR1BQ9H9Y6 1135 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 PSMC3IPQ9P2W1 217 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 HERC5Q9UII4 1024 aaKnown RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 USP27XA6NNY8 438 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 RAPSNQ13702 412 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ENOSF1Q7L5Y1 443 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ERP27Q96DN0 273 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 JSRP1Q96MG2 331 aaPredicted RBP19.04■□□□□ 0.64
SHANK3-202ENST00000414786 KCNS3Q9BQ31 491 aa19.04■□□□□ 0.64
SHANK3-202ENST00000414786 ALDH2P05091 517 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 HERC6Q8IVU3 1022 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 GPRC5CQ9NQ84 441 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 SNX13Q9Y5W8 968 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ITGA8P53708 1063 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 PPP1R26Q5T8A7 1209 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ZCCHC8Q6NZY4 707 aaKnown RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 HPS6Q86YV9 775 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 PIGKQ92643 395 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 LCMT1Q9UIC8 334 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 FAM205CA6NFA0 338 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 NDUFB10O96000 172 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 AP5B1Q2VPB7 878 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 EFHC1Q5JVL4 640 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 CATSPER1Q8NEC5 780 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 GMCL1Q96IK5 515 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 CERS4Q9HA82 394 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 NAA30Q147X3 362 aaPredicted RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 PPM1LQ5SGD2 360 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 GFM2Q969S9 779 aaKnown RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TBC1D23Q9NUY8 699 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 RPS6KL1Q9Y6S9 549 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 SMIM31A0A1B0GVY4 71 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 HNRNPRO43390 633 aaKnown RBP19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TRAPPC5Q8IUR0 188 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ATP6V1G3Q96LB4 118 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TBCDQ9BTW9 1192 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TNKS2Q9H2K2 1166 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ACTR8Q9H981 624 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TOP2BQ02880 1626 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ATP6AP1LQ52LC2 224 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 C16orf46Q6P387 395 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 OSMRQ99650 979 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 ELOVL6Q9H5J4 265 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 RCOR1Q9UKL0 485 aa19.03■□□□□ 0.64
SHANK3-202ENST00000414786 TRDMT1O14717 391 aaKnown RBP19.02■□□□□ 0.64
SHANK3-202ENST00000414786 CASP4P49662 377 aa19.02■□□□□ 0.64
SHANK3-202ENST00000414786 CTCFP49711 727 aaPredicted RBP19.02■□□□□ 0.64
SHANK3-202ENST00000414786 THOP1P52888 689 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms