RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 PIAS1O75925 651 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 IL4RP24394 825 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 BCAR1P56945 870 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 SEPT7Q16181 437 aaKnown RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 DGKDQ16760 1214 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 CATSPER4Q7RTX7 472 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 ZDHHC17Q8IUH5 632 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 IGDCC3Q8IVU1 814 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 PQLC3Q8N755 202 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 MAGEC3Q8TD91 643 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 GCOM2Q9BZD3 368 aaPredicted RBP17.54■□□□□ 0.4
NUP50-203ENST00000407019 ADAMTS10Q9H324 1103 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 RAB6BQ9NRW1 208 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 GINS2Q9Y248 185 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 NME7Q9Y5B8 376 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 TEX264Q9Y6I9 313 aa17.54■□□□□ 0.4
NUP50-203ENST00000407019 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 KBTBD13C9JR72 458 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 PAPSS1O43252 624 aaPredicted RBP17.53■□□□□ 0.4
NUP50-203ENST00000407019 ATP6V1G2O95670 118 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 ZBED1O96006 694 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 HOXA11P31270 313 aaPredicted RBP17.53■□□□□ 0.4
NUP50-203ENST00000407019 ZBTB6Q15916 424 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 SLC9A4Q6AI14 798 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 DPP9Q86TI2 863 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 UNC93AQ86WB7 457 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 SCUBE3Q8IX30 993 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 STK32AQ8WU08 396 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 KHSRPQ92945 711 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■□□□□ 8.2
NUP50-203ENST00000407019 KLHL29Q96CT2 875 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 ZNF670Q9BS34 389 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 FRMD8Q9BZ67 464 aaPredicted RBP17.53■□□□□ 0.4
NUP50-203ENST00000407019 SETD4Q9NVD3 440 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 SLC45A1Q9Y2W3 748 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 HEY1Q9Y5J3 304 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 USH1CQ9Y6N9 552 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 SRCAPQ6ZRS2 3230 aa17.53■□□□□ 0.4
NUP50-203ENST00000407019 IQANK1A0A1B0GTG1 560 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 TCRBV9S1A1TA0A576 114 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 RRN3P2A6NIE6 340 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 IGF2BP3O00425 579 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-203ENST00000407019 MDM4O15151 490 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 TM9SF1O15321 606 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.4
NUP50-203ENST00000407019 KCNJ2P63252 427 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 SETDB1Q15047 1291 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 CA9Q16790 459 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 PNMA8AQ86V59 439 aaPredicted RBP17.52■□□□□ 0.4
NUP50-203ENST00000407019 ANKLE1Q8NAG6 615 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 OR6B3Q8NGW1 331 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 PCDH19Q8TAB3 1148 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 ZNF75CPQ92670 426 aaPredicted RBP17.52■□□□□ 0.4
NUP50-203ENST00000407019 EIF2AQ9BY44 585 aaKnown RBP17.52■□□□□ 0.4
NUP50-203ENST00000407019 FAM49AQ9H0Q0 323 aaPredicted RBP17.52■□□□□ 0.4
NUP50-203ENST00000407019 MORF4L1Q9UBU8 362 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 IKBKGQ9Y6K9 419 aa17.52■□□□□ 0.4
NUP50-203ENST00000407019 BCLAF3A2AJT9 711 aaKnown RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 BTBD19C9JJ37 291 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 HGSO14964 777 aaPredicted RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 RBL1P28749 1068 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 SKIV2L2P42285 1042 aaKnown RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 ZNF200P98182 395 aaPredicted RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 CBLBQ13191 982 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 ARHGAP17Q68EM7 881 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 BANPQ8N9N5 519 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 C18orf25Q96B23 403 aaPredicted RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 THOC1Q96FV9 657 aaKnown RBP17.52■□□□□ 0.39
NUP50-203ENST00000407019 MAML3Q96JK9 1138 aa17.52■□□□□ 0.39
NUP50-203ENST00000407019 ZNF487B1APH4 448 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GABBR2O75899 941 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 MT-ND3P03897 115 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ADRA1DP25100 572 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 HDAC4P56524 1084 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 YWHAZP63104 245 aaKnown RBP17.51■□□□□ 0.39
NUP50-203ENST00000407019 CDC42EP1Q00587 391 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 PTK7Q13308 1070 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 RIPK1Q13546 671 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GLRA4Q5JXX5 417 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 NOTUMQ6P988 496 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GPR142Q7Z601 462 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 TCP10LQ8TDR4 215 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 SLC44A1Q8WWI5 657 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 KLC2Q9H0B6 622 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 BAIAP2L1Q9UHR4 511 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 CCL15-CCL14A0A0B4J2E2 113 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 A8MXQ7 604 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GOLGA8RI6L899 631 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GPR32O75388 356 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 INHBAP08476 426 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 ALADP13716 330 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 CCNB1P14635 433 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 PTPN9P43378 593 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 GRB14Q14449 540 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 CCL15Q16663 113 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 KBTBD12Q3ZCT8 623 aa17.51■□□□□ 0.39
NUP50-203ENST00000407019 PPP6R3Q5H9R7 873 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms