RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 PACSIN3Q9UKS6 424 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 FCHO1O14526 889 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 USP12O75317 370 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 TRUB2O95900 331 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 ABHD2P08910 425 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 RABGGTBP53611 331 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 ATXN3P54252 364 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 AQP5P55064 265 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 KHDC1Q4VXA5 237 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 PPFIBP2Q8ND30 876 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 NKD2Q969F2 451 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 KLRG1Q96E93 195 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 PEBP4Q96S96 227 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 MMP19Q99542 508 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 CPSF3Q9UKF6 684 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 SIPA1L1O43166 1804 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 NFASCO94856 1347 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 A8MXQ7 604 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 KCNA4P22459 653 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 SURF1Q15526 300 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 MAP1SQ66K74 1059 aaPredicted RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 NSL1Q96IY1 281 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 APOC4-APOC2K7ER74 178 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 TXNDC9O14530 226 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 APOC2P02655 101 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 BAG6P46379 1132 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 RASA2Q15283 850 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 C10orf82Q8WW14 230 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 APOL2Q9BQE5 337 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 MYH9P35579 1960 aaKnown RBP13.17□□□□□ -0.3
PPP4R1-202ENST00000400555 ACKR2O00590 384 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 ATP5HO75947 161 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 AMPD1P23109 780 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 PTDSS1P48651 473 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 GBE1Q04446 702 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 C6orf163Q5TEZ5 329 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 CDHR3Q6ZTQ4 885 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 USP6NLQ92738 828 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 UNKQ9C0B0 810 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 NMUR2Q9GZQ4 415 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 CCDC22O60826 627 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 TFE3P19532 575 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 PTPN4P29074 926 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 ABCD1P33897 745 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 AP3M2P53677 418 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 EFHC2Q5JST6 749 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 NAT8LQ8N9F0 302 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 CLEC4CQ8WTT0 213 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 E2F7Q96AV8 911 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 FAM167AQ96KS9 214 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 DPP3Q9NY33 737 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 LYPLA1O75608 230 aaPredicted RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 TCEA3O75764 348 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 SNRPAP09012 282 aaKnown RBP13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 IQCF3P0C7M6 154 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 GM2AP17900 193 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 CALB2P22676 271 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 BST1Q10588 318 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 PPP1R2P3Q6NXS1 205 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 MPP5Q8N3R9 675 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 MTMR14Q8NCE2 650 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 REPS2Q8NFH8 660 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 STK32AQ8WU08 396 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 NT5C1AQ9BXI3 368 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 C2orf40Q9H1Z8 148 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 SIX4Q9UIU6 781 aa13.16□□□□□ -0.3
PPP4R1-202ENST00000400555 TYROBPO43914 113 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CIB2O75838 187 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 UBTFL6P0CB48 400 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 AKAP5P24588 427 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CFAP157Q5JU67 520 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CHST13Q8NET6 341 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 DNAJC9Q8WXX5 260 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 CNPY3Q9BT09 278 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 XYLT2Q9H1B5 865 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 DLGAP2Q9P1A6 1054 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 EME2A4GXA9 379 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 GOLGA8TH3BQL2 631 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 PRPF4O43172 522 aaKnown RBP eCLIP13.15□□□□□ -0.31e-6■■■□□ 18.5
PPP4R1-202ENST00000400555 DDNO94850 711 aaPredicted RBP13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 T-ENOLP0DO92 83 aa13.15□□□□□ -0.3
PPP4R1-202ENST00000400555 RIPK1Q13546 671 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms