RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PCK1P35558 622 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 FLT3P36888 993 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 PBX3P40426 434 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 ALDH7A1P49419 539 aaKnown RBP12.63□□□□□ -0.39
USF1-203ENST00000368021 BCAR1P56945 870 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 MAP3K7CLP57077 242 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 TAS2R40P59535 323 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 C2orf54Q08AI8 447 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 RAB41Q5JT25 222 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
USF1-203ENST00000368021 FAM171A1Q5VUB5 890 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 LRRTM3Q86VH5 581 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
USF1-203ENST00000368021 EMC1Q8N766 993 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 EXD1Q8NHP7 514 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 SMOQ99835 787 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 GPR62Q9BZJ7 368 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
USF1-203ENST00000368021 USTQ9Y2C2 406 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 NLRC5Q86WI3 1866 aa12.63□□□□□ -0.39
USF1-203ENST00000368021 A0A087WUV0 522 aaPredicted RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 OR6C75A6NL08 312 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 SART1O43290 800 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 RNF8O76064 485 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 EFEMP2O95967 443 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TUBBP07437 444 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 GLI1P08151 1106 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 KRT7P08729 469 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 LCP1P13796 627 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 DESP17661 470 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 CTNNB1P35222 781 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 CORO7P57737 925 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 RNASE9P60153 205 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 ADIGQ0VDE8 80 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ZNF211Q13398 564 aaPredicted RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 PPP2R5EQ16537 467 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 NFE2Q16621 373 aaPredicted RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 HADHQ16836 314 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 GLE1Q53GS7 698 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 DAB2IPQ5VWQ8 1189 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ZNF280DQ6N043 979 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ARFGAP1Q8N6T3 406 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 GPATCH11Q8N954 259 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 GDPD5Q8WTR4 605 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 RXFP2Q8WXD0 754 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 FUBP3Q96I24 572 aaKnown RBP eCLIP12.62□□□□□ -0.39
USF1-203ENST00000368021 CWH43Q9H720 699 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 DMAP1Q9NPF5 467 aaPredicted RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 CNGB3Q9NQW8 809 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TMLHEQ9NVH6 421 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 DDX56Q9NY93 547 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 GOLGA6L10A0A0M3HER8 536 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TARSL2A2RTX5 802 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 HHLA1C9JL84 531 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 KRIT1O00522 736 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 HSF2BPO75031 334 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 LINC00271P0C7V0 271 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 SDC4P31431 198 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 PTPN9P43378 593 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 CACNA2D1P54289 1103 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ERVK-21P61565 698 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 MRPS5P82675 430 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 SLC25A11Q02978 314 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 ADCY1Q08828 1119 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ADGRE1Q14246 886 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 LONRF2Q1L5Z9 754 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 CMTR2Q8IYT2 770 aaKnown RBP12.62□□□□□ -0.39
USF1-203ENST00000368021 SIX6OS1Q8N1H7 587 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 SCML4Q8N228 414 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 CLEC4CQ8WTT0 213 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TMEM209Q96SK2 561 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 KCNK16Q96T55 309 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 ANKZF1Q9H8Y5 726 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
USF1-203ENST00000368021 GRAP2O75791 330 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 FOSL2P15408 326 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 BDNFP23560 247 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 TKTL1P51854 596 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 COPS2P61201 443 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 SMARCB1Q12824 385 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 TAF5Q15542 800 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 CCDC14Q49A88 953 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 CTXN3Q4LDR2 81 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 ANKS3Q6ZW76 656 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 TMEM173Q86WV6 379 aaPredicted RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 SLC13A5Q86YT5 568 aaPredicted RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 RNF168Q8IYW5 571 aaPredicted RBP12.61□□□□□ -0.39
USF1-203ENST00000368021 RCOR2Q8IZ40 523 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 MICALL1Q8N3F8 863 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 RUBCNQ92622 972 aa12.61□□□□□ -0.39
USF1-203ENST00000368021 RBM41Q96IZ5 413 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms