RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 PAPOLBQ9NRJ5 636 aaKnown RBP25.05■■□□□ 1.6
DDX42-201ENST00000359353 ZC3H7BQ9UGR2 993 aaKnown RBP25.05■■□□□ 1.6
DDX42-201ENST00000359353 PCDHGC3Q9UN70 934 aa25.05■■□□□ 1.6
DDX42-201ENST00000359353 MSCO60682 206 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 LGR5O75473 907 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 HOXC6P09630 235 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 POLE2P56282 527 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 LRRC36Q1X8D7 754 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 IRGCQ6NXR0 463 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 RIPOR1Q6ZS17 1223 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 PPP1R16BQ96T49 567 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 ZCWPW1Q9H0M4 648 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 STX18Q9P2W9 335 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 MAD1L1Q9Y6D9 718 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 TRIP11Q15643 1979 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 PRR5-ARHGAP8B1AHC4 643 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 I3L4J1 428 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 RNF8O76064 485 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 CSH1P0DML2 217 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 CSH2P0DML3 217 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 RBL1P28749 1068 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 POLR2BP30876 1174 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 CDH5P33151 784 aaPredicted RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 CACNA2D1P54289 1103 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 YWHAEP62258 255 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 ARHGAP8P85298 464 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 ZC3H12AQ5D1E8 599 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 SLC30A9Q6PML9 568 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 UNC5BQ8IZJ1 945 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 REPS2Q8NFH8 660 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 CCDC110Q8TBZ0 833 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 E2F7Q96AV8 911 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 PANX3Q96QZ0 392 aa25.04■■□□□ 1.6
DDX42-201ENST00000359353 PIH1D1Q9NWS0 290 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 RPL26L1Q9UNX3 145 aaKnown RBP25.04■■□□□ 1.6
DDX42-201ENST00000359353 M0QYV0 167 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 SLC26A11Q86WA9 606 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 MPP5Q8N3R9 675 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 PPFIBP2Q8ND30 876 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 SCOCQ9UIL1 159 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 MAP3K7O43318 606 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 CXCL8P10145 99 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 PHACTR1Q9C0D0 580 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 AFG3L2Q9Y4W6 797 aa25.03■■□□□ 1.6
DDX42-201ENST00000359353 LYPLA1O75608 230 aaPredicted RBP25.02■■□□□ 1.6
DDX42-201ENST00000359353 TOM1L1O75674 476 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 SORBS2O94875 1100 aaKnown RBP25.02■■□□□ 1.6
DDX42-201ENST00000359353 TGDSO95455 350 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 C1QAP02745 245 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 GMPRP36959 345 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 OCRLQ01968 901 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 AP1B1Q10567 949 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 KRT72Q14CN4 511 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 TTC39BQ5VTQ0 682 aaPredicted RBP25.02■■□□□ 1.6
DDX42-201ENST00000359353 EEF1DP3Q658K8 133 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 XRRA1Q6P2D8 792 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 NUDCD3Q8IVD9 361 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 POU5F2Q8N7G0 328 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.02■■□□□ 1.6
DDX42-201ENST00000359353 SMC1BQ8NDV3 1235 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 CMASQ8NFW8 434 aaPredicted RBP25.02■■□□□ 1.6
DDX42-201ENST00000359353 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.02■■□□□ 1.6
DDX42-201ENST00000359353 TRAPPC12Q8WVT3 735 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 ADPGKQ9BRR6 497 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 GRIA1P42261 906 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 INHBEP58166 350 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 C16orf46Q6P387 395 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 IZUMO2Q6UXV1 221 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 SAMD7Q7Z3H4 446 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 MAGEB5Q9BZ81 275 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 PLLPQ9Y342 182 aa25.02■■□□□ 1.6
DDX42-201ENST00000359353 NPTXRO95502 500 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 PAPOLAP51003 745 aaKnown RBP25.01■■□□□ 1.59
DDX42-201ENST00000359353 BACE1P56817 501 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 LBRQ14739 615 aaKnown RBP25.01■■□□□ 1.59
DDX42-201ENST00000359353 NOMO1Q15155 1222 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 TAZQ16635 292 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 SCUBE1Q8IWY4 988 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 USP6NLQ92738 828 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 SLC7A8Q9UHI5 535 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 PPM1HQ9ULR3 514 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 E2F8A0AVK6 867 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 CAPN14A8MX76 684 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 NDC80O14777 642 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 RFPL1O75677 317 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 HMGCRP04035 888 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 PRKCBP05771 671 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 CMPK2Q5EBM0 449 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 ULK2Q8IYT8 1036 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 NDUFAF2Q8N183 169 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 NETO2Q8NC67 525 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 NLRP4Q96MN2 994 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 ZNF184Q99676 751 aaPredicted RBP25.01■■□□□ 1.59
DDX42-201ENST00000359353 ACO2Q99798 780 aaKnown RBP25.01■■□□□ 1.59
DDX42-201ENST00000359353 TUBB6Q9BUF5 446 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 MRPL4Q9BYD3 311 aaKnown RBP25.01■■□□□ 1.59
DDX42-201ENST00000359353 VCXQ9H320 206 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 POPDC2Q9HBU9 364 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 EFR3BQ9Y2G0 817 aa25.01■■□□□ 1.59
DDX42-201ENST00000359353 PSME4Q14997 1843 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms