RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 RNF17Q9BXT8 1623 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ANO9A1A5B4 782 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 FAM220BPB1ANY3 271 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TPST1O60507 370 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 SERPINB9P50453 376 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 FAM98BQ52LJ0 330 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 AKAP7Q9P0M2 348 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 PTPN6P29350 595 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 SLC16A2P36021 539 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 JADE3Q92613 823 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 GDAQ9Y2T3 454 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 LGR5O75473 907 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 PARNO95453 639 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ZFP1Q6P2D0 407 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 AFTPHQ6ULP2 937 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TMC4Q7Z404 712 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TRIM62Q9BVG3 475 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 CCDC86Q9H6F5 360 aaKnown RBP11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 GJB4Q9NTQ9 266 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 ADAM22Q9P0K1 906 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
HDGFL3-201ENST00000299633 TRIM64CA6NLI5 447 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ADD2P35612 726 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 UBE3CQ15386 1083 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SGO1Q5FBB7 561 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SPATA4Q8NEY3 305 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PIGOQ8TEQ8 1089 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF804BA4D1E1 1349 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 DHX15O43143 795 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 STOMP27105 288 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 TAF13Q15543 124 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SLC9A4Q6AI14 798 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CASP12Q6UXS9 341 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 MSL3Q8N5Y2 521 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SERPINB12Q96P63 405 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CAMKK2Q96RR4 588 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PCDH12Q9NPG4 1184 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ARHGEF38Q9NXL2 777 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 AATKQ6ZMQ8 1374 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NEDD4P46934 1319 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 STX16-NPEPL1H3BU86 382 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 STX16O14662 325 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 FAM47CQ5HY64 1035 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 EFCAB1Q9HAE3 211 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 M0R036 132 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 DFFAO00273 331 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 APRTP07741 180 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SEL1L3Q68CR1 1132 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SLC9A2Q9UBY0 812 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF24P17028 368 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 GALNTL6Q49A17 601 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 MIER2Q8N344 545 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 RIBC1Q8N443 379 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CAB39LQ9H9S4 337 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NRBP2Q9NSY0 501 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CD274Q9NZQ7 290 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NDUFS3O75489 264 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PGDP52209 483 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ANKS6Q68DC2 871 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 COX4I2Q96KJ9 171 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 HEMGNQ9BXL5 484 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 BHLHE41Q9C0J9 482 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SLC35C2Q9NQQ7 365 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ADAMTS1Q9UHI8 967 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CLRN2A0PK11 232 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 INO80B-WBP1J3KQ70 363 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 DLGAP5Q15398 846 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF613Q6PF04 617 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 FNIP1Q8TF40 1166 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PTPRN2Q92932 1015 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PFDN5Q99471 154 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 INO80BQ9C086 356 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 MARCH7Q9H992 704 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ZNF180Q9UJW8 692 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ATP4AP20648 1035 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 CBX5P45973 191 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PRR23CQ6ZRP0 262 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 ASB12Q8WXK4 309 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PROX1Q92786 737 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 RACGAP1Q9H0H5 632 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SRPRBQ9Y5M8 271 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NR5A2O00482 541 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 PDE8BO95263 885 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 FDPSP14324 419 aaKnown RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 TNFAIP8L3Q5GJ75 292 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 SNX7Q9UNH6 387 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 TMEM120BA0PK00 339 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 HAT1O14929 419 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NCK1P16333 377 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 NNMTP40261 264 aa11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
HDGFL3-201ENST00000299633 DOK7Q18PE1 504 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms