RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FCHO1O14526 889 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 CPA3P15088 417 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 PDPK2PQ6A1A2 396 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 PKN3Q6P5Z2 889 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 STRA8Q7Z7C7 330 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 RIN3Q8TB24 985 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 GDPD5Q8WTR4 605 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 RBBP8Q99708 897 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 DCLK3Q9C098 648 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 LRRC4BQ9NT99 713 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ABT1Q9ULW3 272 aaKnown RBP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 EVPLLA8MZ36 301 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 CBFA2T3O75081 653 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 MT-CO1P00395 513 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 SSTR1P30872 391 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 CLEC16AQ2KHT3 1053 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 LINC00523Q86TU6 105 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 NT5DC3Q86UY8 548 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ELMOD1Q8N336 334 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ARL10Q8N8L6 244 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ARMCX1Q9P291 453 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 OGTO15294 1046 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 PPP3CCP48454 512 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 CSE1LP55060 971 aaKnown RBP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 LACTB2Q53H82 288 aaPredicted RBP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ZNF554Q86TJ5 538 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 MICALL2Q8IY33 904 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 OMA1Q96E52 524 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 USP18Q9UMW8 372 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 SOX13Q9UN79 622 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM95CA0A1B0GW59 222 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 RGS4P49798 205 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 VEPH1Q14D04 833 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ARHGEF6Q15052 776 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 MOXD1Q6UVY6 613 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 STX19Q8N4C7 294 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 RABGEF1Q9UJ41 708 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 ZNRF3Q9ULT6 936 aa16.98■□□□□ 0.31
SH3RF1-201ENST00000284637 WFS1O76024 890 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 FESP07332 822 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 NFIAQ12857 509 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 PKN2Q16513 984 aaKnown RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 SV2CQ496J9 727 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 SYTL3Q4VX76 610 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 NINJ2Q9NZG7 142 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 TIMM44O43615 452 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 ANXA9O76027 345 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 TCF7P36402 384 aaPredicted RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 ELK3P41970 407 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 ZBTB49Q6ZSB9 765 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 POU5F2Q8N7G0 328 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 C2orf69Q8N8R5 385 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 NUDT12Q9BQG2 462 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 MUC3BQ9H195 1237 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 CLIC5Q9NZA1 410 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 SH3GLB1Q9Y371 365 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 MROH7Q68CQ1 1323 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 RAP1GAPP47736 663 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 GJA8P48165 433 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 MTFR1Q15390 333 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 MEA1Q16626 185 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 TCHHL1Q5QJ38 904 aaPredicted RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 BLOC1S5Q8TDH9 187 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 TBC1D10AQ9BXI6 508 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 UNKQ9C0B0 810 aaKnown RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 DPP3Q9NY33 737 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 CTNNAL1Q9UBT7 734 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 PTPRMP28827 1452 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 MEI4A8MW99 385 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 CCNJLQ8IV13 435 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 LRRC40Q9H9A6 602 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 TRPC7Q9HCX4 862 aa16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 R3HDM2Q9Y2K5 976 aaKnown RBP16.97■□□□□ 0.31
SH3RF1-201ENST00000284637 NCF1BA6NI72 391 aaPredicted RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 NCF1CA8MVU1 366 aaPredicted RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 ZC3H11AO75152 810 aaKnown RBP eCLIP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 RTN3O95197 1032 aaPredicted RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 BCL10O95999 233 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 PGK2P07205 417 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 NCF1P14598 390 aaPredicted RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 SKIV2L2P42285 1042 aaKnown RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 NUMBP49757 651 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 MMP14P50281 582 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 FAM131BQ86XD5 332 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 DCUN1D5Q9BTE7 237 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 MAP3K20Q9NYL2 800 aaKnown RBP16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 KLK14Q9P0G3 267 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 C19orf81C9J6K1 198 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 SOAT2O75908 522 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 GRK2P25098 689 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 CYP24A1Q07973 514 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 PDK2Q15119 407 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 GALNTL6Q49A17 601 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 RNF43Q68DV7 783 aa16.96■□□□□ 0.31
SH3RF1-201ENST00000284637 EFL1Q7Z2Z2 1120 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms