RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 FBXO25Q8TCJ0 367 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TMC2Q8TDI7 906 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TMEM39BQ9GZU3 492 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 EFCAB1Q9HAE3 211 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 NR3C2P08235 984 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 RRM2P31350 389 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 CUL2Q13617 745 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 CBX6O95503 412 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 RFC5P40937 340 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 CCT8P50990 548 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 NAPEPLDQ6IQ20 393 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TRIM48Q8IWZ4 208 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 DGCR6LQ9BY27 220 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 KCNH7Q9NS40 1196 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 MRGBPQ9NV56 204 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TAGLN3Q9UI15 199 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TAF4O00268 1085 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 NRF1Q16656 503 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 ZMYM5Q9UJ78 669 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 ASS1P00966 412 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM200BP0CF97 657 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 RAG1P15918 1043 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 ABCG1P45844 678 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 POU6F1Q14863 301 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 PODNQ7Z5L7 613 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CLVS1Q8IUQ0 354 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 EPHX4Q8IUS5 362 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM172AQ8WUF8 416 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SENP6Q9GZR1 1112 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CCNT2O60583 730 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 GJB6O95452 261 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SLC2A4P14672 509 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 STX5Q13190 355 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CRYMQ14894 314 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 ARMC6Q6NXE6 501 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 HDAC7Q8WUI4 952 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 MOV10L1Q9BXT6 1211 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 NIF3L1Q9GZT8 377 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CTNNAL1Q9UBT7 734 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 TUBE1Q9UJT0 475 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 PCDHB8Q9UN66 801 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 AP4S1Q9Y587 144 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 TRIM24O15164 1050 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 GLRA3O75311 464 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SNUPNO95149 360 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CALCAP01258 141 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 HALP42357 657 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 STARD3Q14849 445 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SV2CQ496J9 727 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 PPP1R10Q96QC0 940 aaKnown RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 AGPAT3Q9NRZ7 376 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 TBX20Q9UMR3 447 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 MED24O75448 989 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 GARTP22102 1010 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 PLK1P53350 603 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 ITIH4Q14624 930 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM228AQ86W67 206 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CBWD1Q9BRT8 395 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 DCDC2Q9UHG0 476 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 TCF7P36402 384 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 SERPINB8P50452 374 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CNTN1Q12860 1018 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 HIST2H2ACQ16777 129 aaPredicted RBP17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 HIST2H2AA3Q6FI13 130 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 CAPSLQ8WWF8 208 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 OLFM1Q99784 485 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 RIBC2Q9H4K1 309 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 NT5MQ9NPB1 228 aa17.31■□□□□ 0.36
TSPAN3-201ENST00000267970 INPP4BO15327 924 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 HS6ST1O60243 411 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 AP1G2O75843 785 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 COMMD2Q86X83 199 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 KBTBD2Q8IY47 623 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 TTC39CQ8N584 583 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 DMGDHQ9UI17 866 aaKnown RBP17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 P4HA2O15460 535 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 FYNP06241 537 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 KRT35Q92764 455 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ATXN3LQ9H3M9 355 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 CLASP1Q7Z460 1538 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 A0A1W2PQJ5 194 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ASB14A6NK59 587 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 AP5Z1O43299 807 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 EFHC1Q5JVL4 640 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ARMC4Q5T2S8 1044 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ST13P5Q8NFI4 369 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 SEPT1Q8WYJ6 367 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 TADA1Q96BN2 335 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 OSGEPL1Q9H4B0 414 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 ADAMTS12P58397 1594 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 TRAPPC3O43617 180 aa17.3■□□□□ 0.36
TSPAN3-201ENST00000267970 PLA2G6O60733 806 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms