RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.56□□□□□ -0.56
CSMD1-217ENST00000602723 CCP110O43303 1012 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
CSMD1-217ENST00000602723 CNKSR2Q8WXI2 1034 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 APAF1O14727 1248 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 OFD1O75665 1012 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 HNRNPMP52272 730 aaKnown RBP eCLIP11.56□□□□□ -0.56
CSMD1-217ENST00000602723 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
CSMD1-217ENST00000602723 HSP90AB2PQ58FF8 381 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 HMGN5P82970 282 aaKnown RBP11.55□□□□□ -0.56
CSMD1-217ENST00000602723 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 RALYLQ86SE5 291 aaKnown RBP11.55□□□□□ -0.56
CSMD1-217ENST00000602723 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 SDF4Q9BRK5 362 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 CAVIN1Q6NZI2 390 aaKnown RBP11.55□□□□□ -0.56
CSMD1-217ENST00000602723 SMC2O95347 1197 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 RNF214Q8ND24 703 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 BRMS1Q9HCU9 246 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 KINO60870 393 aaKnown RBP11.55□□□□□ -0.56
CSMD1-217ENST00000602723 AAMPQ13685 434 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 LETM1O95202 739 aaPredicted RBP11.55□□□□□ -0.56
CSMD1-217ENST00000602723 LNPKQ9C0E8 428 aa11.55□□□□□ -0.56
CSMD1-217ENST00000602723 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 CUX1P39880 1505 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 CDC45O75419 566 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 DDX58O95786 925 aaKnown RBP11.54□□□□□ -0.56
CSMD1-217ENST00000602723 LEKR1Q6ZMV7 388 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 TSPY26PQ9H489 355 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 MBD3O95983 291 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 RIPK4P57078 832 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
CSMD1-217ENST00000602723 KIF7Q2M1P5 1343 aa11.54□□□□□ -0.56
CSMD1-217ENST00000602723 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
CSMD1-217ENST00000602723 MROH2BQ7Z745 1585 aa11.53□□□□□ -0.56
CSMD1-217ENST00000602723 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
CSMD1-217ENST00000602723 AXDND1Q5T1B0 1012 aaPredicted RBP11.53□□□□□ -0.56
CSMD1-217ENST00000602723 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.52□□□□□ -0.56
CSMD1-217ENST00000602723 HSP90AB4PQ58FF6 505 aa11.52□□□□□ -0.57
CSMD1-217ENST00000602723 PSMA5P28066 241 aa11.52□□□□□ -0.57
CSMD1-217ENST00000602723 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
CSMD1-217ENST00000602723 TRAK2O60296 914 aa11.51□□□□□ -0.57
CSMD1-217ENST00000602723 PDCP20941 246 aa11.51□□□□□ -0.57
CSMD1-217ENST00000602723 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
CSMD1-217ENST00000602723 ZFYVE27Q5T4F4 411 aa11.51□□□□□ -0.57
CSMD1-217ENST00000602723 PKNOX2Q96KN3 472 aa11.51□□□□□ -0.57
CSMD1-217ENST00000602723 DIAPH1O60610 1272 aaKnown RBP11.51□□□□□ -0.57
CSMD1-217ENST00000602723 GOLGA6L10A6NI86 522 aa11.5□□□□□ -0.57
CSMD1-217ENST00000602723 SMARCE1Q969G3 411 aa11.5□□□□□ -0.57
CSMD1-217ENST00000602723 CNTLNQ9NXG0 1405 aa11.5□□□□□ -0.57
CSMD1-217ENST00000602723 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
CSMD1-217ENST00000602723 XBP1P17861 261 aa11.5□□□□□ -0.57
CSMD1-217ENST00000602723 MINK1Q8N4C8 1332 aaPredicted RBP11.5□□□□□ -0.57
CSMD1-217ENST00000602723 CNTROBQ8N137 903 aa11.49□□□□□ -0.57
CSMD1-217ENST00000602723 PDS5BQ9NTI5 1447 aa11.49□□□□□ -0.57
CSMD1-217ENST00000602723 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
CSMD1-217ENST00000602723 EVA1CP58658 441 aa11.49□□□□□ -0.57
CSMD1-217ENST00000602723 KIAA0754O94854 1291 aa11.49□□□□□ -0.57
CSMD1-217ENST00000602723 HSP90AB3PQ58FF7 597 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 MAGEC2Q9UBF1 373 aaPredicted RBP11.48□□□□□ -0.57
CSMD1-217ENST00000602723 MIA2Q96PC5 1412 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 ZRSR2Q15696 482 aaKnown RBP11.48□□□□□ -0.57
CSMD1-217ENST00000602723 ERLIN2O94905 339 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 SPC24Q8NBT2 197 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 GNAI1P63096 354 aa11.48□□□□□ -0.57
CSMD1-217ENST00000602723 RABEP1Q15276 862 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 KRI1Q8N9T8 703 aaKnown RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 TSPYL4Q9UJ04 414 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 SKIDA1Q1XH10 827 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 SART3Q15020 963 aaKnown RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 FIBPO43427 364 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 UBTFL1P0CB47 393 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 RBM10P98175 930 aaKnown RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 WASHC4Q2M389 1173 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 FILIP1LQ4L180 1135 aa11.47□□□□□ -0.57
CSMD1-217ENST00000602723 ZNF396Q96N95 335 aaPredicted RBP11.47□□□□□ -0.57
CSMD1-217ENST00000602723 FMNL2Q96PY5 1086 aa11.46□□□□□ -0.57
CSMD1-217ENST00000602723 TXLNAP40222 546 aa11.46□□□□□ -0.57
CSMD1-217ENST00000602723 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
CSMD1-217ENST00000602723 MCM2P49736 904 aa11.46□□□□□ -0.58
CSMD1-217ENST00000602723 FSD1Q9BTV5 496 aa11.46□□□□□ -0.58
CSMD1-217ENST00000602723 FYB1O15117 783 aa11.46□□□□□ -0.58
CSMD1-217ENST00000602723 CCDC7Q96M83 1385 aa11.45□□□□□ -0.58
CSMD1-217ENST00000602723 DHX8Q14562 1220 aaKnown RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 NEUROD6Q96NK8 337 aa11.45□□□□□ -0.58
CSMD1-217ENST00000602723 ZNHIT6Q9NWK9 470 aaKnown RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 CCDC192P0DO97 292 aa11.45□□□□□ -0.58
CSMD1-217ENST00000602723 BRD4O60885 1362 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 PRPF40AO75400 957 aaKnown RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 GOLGA6L7A0A1B0GV03 622 aa11.45□□□□□ -0.58
CSMD1-217ENST00000602723 CDK5RAP3Q96JB5 506 aa11.45□□□□□ -0.58
CSMD1-217ENST00000602723 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
CSMD1-217ENST00000602723 PIP4K2AP48426 406 aaPredicted RBP11.44□□□□□ -0.58
CSMD1-217ENST00000602723 MSH5O43196 834 aa11.44□□□□□ -0.58
CSMD1-217ENST00000602723 NEK4P51957 841 aa11.44□□□□□ -0.58
CSMD1-217ENST00000602723 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
CSMD1-217ENST00000602723 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms