RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 CLK2P49760 499 aaKnown RBP5.15□□□□□ -1.59
COPS3-213ENST00000577210 PRPF38BQ5VTL8 546 aaKnown RBP5.15□□□□□ -1.59
COPS3-213ENST00000577210 SPIRE2Q8WWL2 714 aa5.15□□□□□ -1.59
COPS3-213ENST00000577210 PPEF1O14829 653 aaPredicted RBP5.14□□□□□ -1.59
COPS3-213ENST00000577210 SPTLC1O15269 473 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 GGCXP38435 758 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 ATP6V1AP38606 617 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 Q3C1V9 767 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 PUS10Q3MIT2 529 aaKnown RBP5.14□□□□□ -1.59
COPS3-213ENST00000577210 TMEM259Q4ZIN3 620 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 MYSM1Q5VVJ2 828 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 RIC3Q7Z5B4 369 aa5.14□□□□□ -1.59
COPS3-213ENST00000577210 NRG2O14511 850 aaPredicted RBP5.13□□□□□ -1.59
COPS3-213ENST00000577210 TRIM67Q6ZTA4 783 aa5.13□□□□□ -1.59
COPS3-213ENST00000577210 PRM3Q9NNZ6 103 aa5.13□□□□□ -1.59
COPS3-213ENST00000577210 HOXA2O43364 376 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 ADH1BP00325 375 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 PLA2G2CQ5R387 149 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 RSBN1LQ6PCB5 846 aaPredicted RBP5.12□□□□□ -1.59
COPS3-213ENST00000577210 BANK1Q8NDB2 785 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.12□□□□□ -1.59
COPS3-213ENST00000577210 ZBTB3Q9H5J0 574 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 PDZRN3Q9UPQ7 1066 aa5.12□□□□□ -1.59
COPS3-213ENST00000577210 NR1I2O75469 434 aa5.11□□□□□ -1.59
COPS3-213ENST00000577210 FDX1P10109 184 aa5.11□□□□□ -1.59
COPS3-213ENST00000577210 POLR3EQ9NVU0 708 aa5.11□□□□□ -1.59
COPS3-213ENST00000577210 NUTM2BA6NNL0 878 aaPredicted RBP5.1□□□□□ -1.59
COPS3-213ENST00000577210 NUTM2EB1AL46 878 aaPredicted RBP5.1□□□□□ -1.59
COPS3-213ENST00000577210 SOCS7O14512 581 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 SLC19A1P41440 591 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 FUT2Q10981 343 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 NUTM2DQ5VT03 806 aaPredicted RBP5.1□□□□□ -1.59
COPS3-213ENST00000577210 PPP2R2DQ66LE6 453 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 LIAT1Q6ZQX7 453 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 C14orf37Q86TY3 774 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 NUTM2AQ8IVF1 878 aaPredicted RBP5.1□□□□□ -1.59
COPS3-213ENST00000577210 SCUBE3Q8IX30 993 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 ANKLE1Q8NAG6 615 aa5.1□□□□□ -1.59
COPS3-213ENST00000577210 SALL2Q9Y467 1007 aaPredicted RBP5.1□□□□□ -1.59
COPS3-213ENST00000577210 MOXD2PA6NHM9 499 aa5.09□□□□□ -1.59
COPS3-213ENST00000577210 MTMR2Q13614 643 aa5.09□□□□□ -1.59
COPS3-213ENST00000577210 HELBQ8NG08 1087 aaPredicted RBP5.09□□□□□ -1.59
COPS3-213ENST00000577210 SLC6A16Q9GZN6 736 aa5.09□□□□□ -1.59
COPS3-213ENST00000577210 LILRB3O75022 631 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 MORN1Q5T089 497 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 SPRYD7Q5W111 196 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 ZNF787Q6DD87 383 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 WWC1Q8IX03 1113 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 ZNF775Q96BV0 537 aaPredicted RBP5.08□□□□□ -1.6
COPS3-213ENST00000577210 SPSB2Q99619 263 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 PRDM9Q9NQV7 894 aa5.08□□□□□ -1.6
COPS3-213ENST00000577210 C6orf229H3BNL8 230 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 TNFRSF10AO00220 468 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 ZNF697Q5TEC3 545 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 PNMA1Q8ND90 353 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 THAP11Q96EK4 314 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 LIMD1Q9UGP4 676 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 SLC27A5Q9Y2P5 690 aa5.07□□□□□ -1.6
COPS3-213ENST00000577210 RAD21O60216 631 aa5.06□□□□□ -1.6
COPS3-213ENST00000577210 FMNL1O95466 1100 aaPredicted RBP5.06□□□□□ -1.6
COPS3-213ENST00000577210 NDUFV2P19404 249 aa5.06□□□□□ -1.6
COPS3-213ENST00000577210 RFC5P40937 340 aa5.06□□□□□ -1.6
COPS3-213ENST00000577210 DESI1Q6ICB0 168 aa5.06□□□□□ -1.6
COPS3-213ENST00000577210 ZNF598Q86UK7 904 aaKnown RBP5.06□□□□□ -1.6
COPS3-213ENST00000577210 RETREG3Q86VR2 466 aa5.06□□□□□ -1.6
COPS3-213ENST00000577210 HRCP23327 699 aa5.05□□□□□ -1.6
COPS3-213ENST00000577210 CSPP1Q1MSJ5 1256 aa5.05□□□□□ -1.6
COPS3-213ENST00000577210 RNF19BQ6ZMZ0 732 aa5.05□□□□□ -1.6
COPS3-213ENST00000577210 FAM160A2Q8N612 972 aaPredicted RBP5.05□□□□□ -1.6
COPS3-213ENST00000577210 PROCA1Q8NCQ7 364 aaPredicted RBP5.05□□□□□ -1.6
COPS3-213ENST00000577210 FCF1Q9Y324 198 aaKnown RBP5.05□□□□□ -1.6
COPS3-213ENST00000577210 GDF9O60383 454 aa5.04□□□□□ -1.6
COPS3-213ENST00000577210 HLA-CQ95604 372 aa5.04□□□□□ -1.6
COPS3-213ENST00000577210 USB1Q9BQ65 265 aaKnown RBP5.04□□□□□ -1.6
COPS3-213ENST00000577210 AP1G2O75843 785 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 UBTFP17480 764 aaKnown RBP5.03□□□□□ -1.6
COPS3-213ENST00000577210 PRR20EP86478 221 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PRR20CP86479 221 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PRR20DP86480 221 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PRR20BP86481 221 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PRR20AP86496 221 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 BRICD5Q6PL45 260 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PKD2L1Q9P0L9 805 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 PCDHB15Q9Y5E8 787 aa5.03□□□□□ -1.6
COPS3-213ENST00000577210 FAM187AA6NFU0 413 aa5.02□□□□□ -1.61
COPS3-213ENST00000577210 MYT1Q01538 1121 aa5.02□□□□□ -1.61
COPS3-213ENST00000577210 MSS51Q4VC12 460 aa5.02□□□□□ -1.61
COPS3-213ENST00000577210 PKDCCQ504Y2 493 aa5.02□□□□□ -1.61
COPS3-213ENST00000577210 ZMYND15Q9H091 742 aa5.02□□□□□ -1.61
COPS3-213ENST00000577210 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 A6NJR5 290 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 FOXC1Q12948 553 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 MCM6Q14566 821 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 QPCTQ16769 361 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 PRR7Q8TB68 274 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 ZNF592Q92610 1267 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 PCDHGC3Q9UN70 934 aa5.01□□□□□ -1.61
COPS3-213ENST00000577210 ST8SIA5O15466 376 aa5□□□□□ -1.61
COPS3-213ENST00000577210 GUCA2AQ02747 115 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms