RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 SCRIBQ14160 1630 aa6.9□□□□□ -1.3
UBE2D3-226ENST00000508635 CTC1Q2NKJ3 1217 aa6.9□□□□□ -1.3
UBE2D3-226ENST00000508635 GIGYF2Q6Y7W6 1299 aaKnown RBP6.9□□□□□ -1.3
UBE2D3-226ENST00000508635 TNFRSF10AO00220 468 aa6.89□□□□□ -1.31
UBE2D3-226ENST00000508635 SLF2Q8IX21 1173 aa6.89□□□□□ -1.31
UBE2D3-226ENST00000508635 RDH13Q8NBN7 331 aa6.89□□□□□ -1.31
UBE2D3-226ENST00000508635 PRR14Q9BWN1 585 aa6.89□□□□□ -1.31
UBE2D3-226ENST00000508635 AVPP01185 164 aa6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 SSTR3P32745 418 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 SLC4A3P48751 1232 aa6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 BRPF1P55201 1214 aaPredicted RBP6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 COPS2P61201 443 aa6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 GMPR2Q9P2T1 348 aaKnown RBP6.88□□□□□ -1.31
UBE2D3-226ENST00000508635 TERTO14746 1132 aaKnown RBP6.87□□□□□ -1.31
UBE2D3-226ENST00000508635 AXIN1O15169 862 aa6.87□□□□□ -1.31
UBE2D3-226ENST00000508635 SLC10A3P09131 477 aa6.87□□□□□ -1.31
UBE2D3-226ENST00000508635 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
UBE2D3-226ENST00000508635 FAM217BQ9NTX9 383 aaPredicted RBP6.87□□□□□ -1.31
UBE2D3-226ENST00000508635 MS4A1P11836 297 aa6.86□□□□□ -1.31
UBE2D3-226ENST00000508635 SMCPP49901 116 aaPredicted RBP6.85□□□□□ -1.31
UBE2D3-226ENST00000508635 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
UBE2D3-226ENST00000508635 CFHP08603 1231 aa6.84□□□□□ -1.31
UBE2D3-226ENST00000508635 RSPH4AQ5TD94 716 aa6.84□□□□□ -1.31
UBE2D3-226ENST00000508635 LIAT1Q6ZQX7 453 aa6.84□□□□□ -1.31
UBE2D3-226ENST00000508635 BEGAINQ9BUH8 593 aa6.84□□□□□ -1.31
UBE2D3-226ENST00000508635 CD46P15529 392 aa6.83□□□□□ -1.32
UBE2D3-226ENST00000508635 ZSCAN1Q8NBB4 408 aa6.82□□□□□ -1.32
UBE2D3-226ENST00000508635 FAM117AQ9C073 453 aa6.82□□□□□ -1.32
UBE2D3-226ENST00000508635 DACH1Q9UI36 760 aa6.82□□□□□ -1.32
UBE2D3-226ENST00000508635 CC2D2AQ9P2K1 1620 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 GCGRP47871 477 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 IL27Q8NEV9 243 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 SLC16A10Q8TF71 515 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 SENP2Q9HC62 589 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 PCDHB3Q9Y5E6 796 aa6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 EIF4G1Q04637 1599 aaKnown RBP6.81□□□□□ -1.32
UBE2D3-226ENST00000508635 KMT5BQ4FZB7 885 aa6.8□□□□□ -1.32
UBE2D3-226ENST00000508635 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
UBE2D3-226ENST00000508635 TLL1O43897 1013 aa6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 FUT2Q10981 343 aa6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 PUS10Q3MIT2 529 aaKnown RBP6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 LCE2CQ5TA81 110 aa6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 NUTM1Q86Y26 1132 aa6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 CECR2Q9BXF3 1484 aa6.79□□□□□ -1.32
UBE2D3-226ENST00000508635 ACTN4O43707 911 aaKnown RBP6.78□□□□□ -1.32
UBE2D3-226ENST00000508635 KDM4AO75164 1064 aa6.78□□□□□ -1.32
UBE2D3-226ENST00000508635 PLEKHG3A1L390 1219 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 SPIRE2Q8WWL2 714 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 HLA-CQ95604 372 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 TBC1D2Q9BYX2 928 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
UBE2D3-226ENST00000508635 PPEF1O14829 653 aaPredicted RBP6.76□□□□□ -1.33
UBE2D3-226ENST00000508635 CYP4X1Q8N118 509 aa6.76□□□□□ -1.33
UBE2D3-226ENST00000508635 KIFC2Q96AC6 838 aa6.76□□□□□ -1.33
UBE2D3-226ENST00000508635 TOR4AQ9NXH8 423 aa6.76□□□□□ -1.33
UBE2D3-226ENST00000508635 S1PR4O95977 384 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 NDUFV2P19404 249 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 ATP6V1AP38606 617 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 GUCA2AQ02747 115 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 FOXC1Q12948 553 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 PLA2G2CQ5R387 149 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 TRIM47Q96LD4 638 aa6.75□□□□□ -1.33
UBE2D3-226ENST00000508635 MOXD2PA6NHM9 499 aa6.74□□□□□ -1.33
UBE2D3-226ENST00000508635 POLR3EQ9NVU0 708 aa6.74□□□□□ -1.33
UBE2D3-226ENST00000508635 ATP1B4Q9UN42 357 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-226ENST00000508635 HOXA2O43364 376 aa6.73□□□□□ -1.33
UBE2D3-226ENST00000508635 MYSM1Q5VVJ2 828 aa6.73□□□□□ -1.33
UBE2D3-226ENST00000508635 NPAS3Q8IXF0 933 aa6.73□□□□□ -1.33
UBE2D3-226ENST00000508635 ATP13A2Q9NQ11 1180 aa6.73□□□□□ -1.33
UBE2D3-226ENST00000508635 SNRPBP14678 240 aaKnown RBP6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 LORP23490 312 aaPredicted RBP6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 RPIAP49247 311 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 USP46P62068 366 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 CSPP1Q1MSJ5 1256 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 GRIPAP1Q4V328 841 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 MORN1Q5T089 497 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 IRF7Q92985 503 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 KRTAP4-8Q9BYQ9 185 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
UBE2D3-226ENST00000508635 ADH1BP00325 375 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 FDX1P10109 184 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 DIXDC1Q155Q3 683 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 RIC3Q7Z5B4 369 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 SCUBE3Q8IX30 993 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 RSPH6AQ9H0K4 717 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.34
UBE2D3-226ENST00000508635 NR1I2O75469 434 aa6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 CD2BP2O95400 341 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 RSBN1LQ6PCB5 846 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 PROCA1Q8NCQ7 364 aaPredicted RBP6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 SYMPKQ92797 1274 aaKnown RBP6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 SLC6A16Q9GZN6 736 aa6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 PCDHB15Q9Y5E8 787 aa6.7□□□□□ -1.34
UBE2D3-226ENST00000508635 SPTLC1O15269 473 aa6.69□□□□□ -1.34
UBE2D3-226ENST00000508635 GMPRP36959 345 aa6.69□□□□□ -1.34
UBE2D3-226ENST00000508635 CLK2P49760 499 aaKnown RBP6.69□□□□□ -1.34
UBE2D3-226ENST00000508635 KCNMA1Q12791 1236 aa6.69□□□□□ -1.34
UBE2D3-226ENST00000508635 SH3D19Q5HYK7 790 aa6.69□□□□□ -1.34
UBE2D3-226ENST00000508635 PCDHGC3Q9UN70 934 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms