RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 SPTLC1O15269 473 aa8.43□□□□□ -1.06
RTN4-215ENST00000491592 NDUFV2P19404 249 aa8.43□□□□□ -1.06
RTN4-215ENST00000491592 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
RTN4-215ENST00000491592 HLA-CQ95604 372 aa8.43□□□□□ -1.06
RTN4-215ENST00000491592 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.43□□□□□ -1.06
RTN4-215ENST00000491592 GJA5P36382 358 aa8.42□□□□□ -1.06
RTN4-215ENST00000491592 GUCA2AQ02747 115 aa8.42□□□□□ -1.06
RTN4-215ENST00000491592 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
RTN4-215ENST00000491592 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
RTN4-215ENST00000491592 FDX1P10109 184 aa8.41□□□□□ -1.06
RTN4-215ENST00000491592 ATP6V1AP38606 617 aa8.41□□□□□ -1.06
RTN4-215ENST00000491592 SLC19A1P41440 591 aa8.41□□□□□ -1.06
RTN4-215ENST00000491592 TUSC1Q2TAM9 212 aa8.41□□□□□ -1.06
RTN4-215ENST00000491592 GRIPAP1Q4V328 841 aa8.41□□□□□ -1.06
RTN4-215ENST00000491592 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
RTN4-215ENST00000491592 RNF223E7ERA6 249 aa8.4□□□□□ -1.06
RTN4-215ENST00000491592 CSPP1Q1MSJ5 1256 aa8.4□□□□□ -1.06
RTN4-215ENST00000491592 ZNF787Q6DD87 383 aa8.4□□□□□ -1.06
RTN4-215ENST00000491592 PUS10Q3MIT2 529 aaKnown RBP8.39□□□□□ -1.07
RTN4-215ENST00000491592 ANKLE1Q8NAG6 615 aa8.39□□□□□ -1.07
RTN4-215ENST00000491592 MORN1Q5T089 497 aa8.38□□□□□ -1.07
RTN4-215ENST00000491592 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
RTN4-215ENST00000491592 PCDHB15Q9Y5E8 787 aa8.38□□□□□ -1.07
RTN4-215ENST00000491592 QPCTQ16769 361 aa8.37□□□□□ -1.07
RTN4-215ENST00000491592 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
RTN4-215ENST00000491592 NR1I2O75469 434 aa8.36□□□□□ -1.07
RTN4-215ENST00000491592 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
RTN4-215ENST00000491592 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
RTN4-215ENST00000491592 FBXO31Q5XUX0 539 aaPredicted RBP8.36□□□□□ -1.07
RTN4-215ENST00000491592 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
RTN4-215ENST00000491592 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
RTN4-215ENST00000491592 LILRB3O75022 631 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 DGAT1O75907 488 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 PRR20EP86478 221 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 PRR20CP86479 221 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 PRR20DP86480 221 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 PRR20BP86481 221 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 PRR20AP86496 221 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 SLC27A5Q9Y2P5 690 aa8.35□□□□□ -1.07
RTN4-215ENST00000491592 TLL1O43897 1013 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 S1PR4O95977 384 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 ADH1BP00325 375 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 HRCP23327 699 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 RFC5P40937 340 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 MTMR2Q13614 643 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 PPP2R2DQ66LE6 453 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 TRIM67Q6ZTA4 783 aa8.34□□□□□ -1.07
RTN4-215ENST00000491592 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
RTN4-215ENST00000491592 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
RTN4-215ENST00000491592 C6orf229H3BNL8 230 aa8.33□□□□□ -1.08
RTN4-215ENST00000491592 Q3C1V9 767 aa8.33□□□□□ -1.08
RTN4-215ENST00000491592 NUTM2DQ5VT03 806 aaPredicted RBP8.33□□□□□ -1.08
RTN4-215ENST00000491592 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
RTN4-215ENST00000491592 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
RTN4-215ENST00000491592 RNF19BQ6ZMZ0 732 aa8.32□□□□□ -1.08
RTN4-215ENST00000491592 EMID1Q96A84 441 aaPredicted RBP8.32□□□□□ -1.08
RTN4-215ENST00000491592 PPEF1O14829 653 aaPredicted RBP8.31□□□□□ -1.08
RTN4-215ENST00000491592 ZNF697Q5TEC3 545 aa8.31□□□□□ -1.08
RTN4-215ENST00000491592 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
RTN4-215ENST00000491592 SLC6A16Q9GZN6 736 aa8.31□□□□□ -1.08
RTN4-215ENST00000491592 SPDYE5A6NIY4 337 aa8.3□□□□□ -1.08
RTN4-215ENST00000491592 LIAT1Q6ZQX7 453 aa8.3□□□□□ -1.08
RTN4-215ENST00000491592 ERICH6Q7L0X2 663 aa8.3□□□□□ -1.08
RTN4-215ENST00000491592 RETREG3Q86VR2 466 aa8.3□□□□□ -1.08
RTN4-215ENST00000491592 CFAP99D6REC4 459 aa8.29□□□□□ -1.08
RTN4-215ENST00000491592 RANGAP1P46060 587 aaPredicted RBP8.29□□□□□ -1.08
RTN4-215ENST00000491592 MCM6Q14566 821 aa8.29□□□□□ -1.08
RTN4-215ENST00000491592 SCUBE3Q8IX30 993 aa8.29□□□□□ -1.08
RTN4-215ENST00000491592 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
RTN4-215ENST00000491592 FMNL1O95466 1100 aaPredicted RBP8.28□□□□□ -1.08
RTN4-215ENST00000491592 MYT1Q01538 1121 aa8.28□□□□□ -1.08
RTN4-215ENST00000491592 FLIIQ13045 1269 aa8.28□□□□□ -1.08
RTN4-215ENST00000491592 HOMEZQ8IX15 550 aa8.28□□□□□ -1.08
RTN4-215ENST00000491592 THAP11Q96EK4 314 aa8.28□□□□□ -1.08
RTN4-215ENST00000491592 TTBK1Q5TCY1 1321 aaPredicted RBP8.28□□□□□ -1.08
RTN4-215ENST00000491592 GDF9O60383 454 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 TMEM259Q4ZIN3 620 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 BRICD5Q6PL45 260 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 HELBQ8NG08 1087 aaPredicted RBP8.27□□□□□ -1.09
RTN4-215ENST00000491592 PRR7Q8TB68 274 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 TSC1Q92574 1164 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 ZNF775Q96BV0 537 aaPredicted RBP8.27□□□□□ -1.09
RTN4-215ENST00000491592 TIMELESSQ9UNS1 1208 aa8.27□□□□□ -1.09
RTN4-215ENST00000491592 AP1G2O75843 785 aa8.26□□□□□ -1.09
RTN4-215ENST00000491592 USP17L8P0C7I0 530 aa8.26□□□□□ -1.09
RTN4-215ENST00000491592 C14orf37Q86TY3 774 aa8.26□□□□□ -1.09
RTN4-215ENST00000491592 SPSB2Q99619 263 aa8.26□□□□□ -1.09
RTN4-215ENST00000491592 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
RTN4-215ENST00000491592 FAM187AA6NFU0 413 aa8.25□□□□□ -1.09
RTN4-215ENST00000491592 BANK1Q8NDB2 785 aa8.25□□□□□ -1.09
RTN4-215ENST00000491592 TNFRSF10AO00220 468 aa8.24□□□□□ -1.09
RTN4-215ENST00000491592 MSS51Q4VC12 460 aa8.24□□□□□ -1.09
RTN4-215ENST00000491592 DESI1Q6ICB0 168 aa8.23□□□□□ -1.09
RTN4-215ENST00000491592 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
RTN4-215ENST00000491592 JUNDP17535 347 aa8.22□□□□□ -1.09
RTN4-215ENST00000491592 RPIAP49247 311 aa8.22□□□□□ -1.09
RTN4-215ENST00000491592 CTDSPL2Q05D32 466 aa8.22□□□□□ -1.09
RTN4-215ENST00000491592 PLA2G2CQ5R387 149 aa8.22□□□□□ -1.09
RTN4-215ENST00000491592 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms