RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 TNNC2P02585 160 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 ADH5P11766 374 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 WARSP23381 471 aaKnown RBP9.25□□□□□ -0.93
CHD2-212ENST00000627622 ITPKAP23677 461 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 HOXD12P35452 270 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SIM1P81133 766 aaPredicted RBP9.25□□□□□ -0.93
CHD2-212ENST00000627622 TAF10Q12962 218 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SEMA3BQ13214 749 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SURF1Q15526 300 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 DUOXA1Q1HG43 343 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 TDRD10Q5VZ19 366 aaKnown RBP9.25□□□□□ -0.93
CHD2-212ENST00000627622 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 LRSAM1Q6UWE0 723 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 PIP4P1Q86T03 277 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 DDX42Q86XP3 938 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD2-212ENST00000627622 OR5B17Q8NGF7 314 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 CEP76Q8TAP6 659 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SLITRK1Q96PX8 696 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 MMS19Q96T76 1030 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 ARHGEF4Q9NR80 690 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SMPD4Q9NXE4 827 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 CFAP97Q9P2B7 532 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 TBC1D14Q9P2M4 693 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 SMC3Q9UQE7 1217 aa9.25□□□□□ -0.93
CHD2-212ENST00000627622 FASNP49327 2511 aaKnown RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 SPAARA0A1B0GVQ0 90 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 TCRBV21S2A2A0A5A6 115 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 FRMD3A2A2Y4 597 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 SCAMP3O14828 347 aaKnown RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 CFIP05156 583 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 MBL2P11226 248 aaPredicted RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 IDEP14735 1019 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 RDXP35241 583 aaKnown RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 GNL1P36915 607 aaPredicted RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 ATXN3P54252 364 aaPredicted RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 GAD2Q05329 585 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 KDSRQ06136 332 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 RING1Q06587 406 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 MDH1BQ5I0G3 518 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 HS2ST1Q7LGA3 356 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 PHTF2Q8N3S3 785 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 HDDC3Q8N4P3 179 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 KCNV2Q8TDN2 545 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 FGFBP2Q9BYJ0 223 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 ZDHHC4Q9NPG8 344 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 KLK13Q9UKR3 277 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 SLC6A14Q9UN76 642 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 PTPRJQ12913 1337 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 ATXN2Q99700 1313 aaKnown RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 PLXNB3Q9ULL4 1909 aa9.24□□□□□ -0.93
CHD2-212ENST00000627622 ANKRD11Q6UB99 2663 aaPredicted RBP9.24□□□□□ -0.93
CHD2-212ENST00000627622 E2F8A0AVK6 867 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 FAM221BA6H8Z2 402 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 TBC1D3BA6NDS4 549 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 ZNF233A6NK53 670 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 H0Y626 953 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 PRPF6O94906 941 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 TRIM16O95361 564 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 SERPINF2P08697 491 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 TXLNAP40222 546 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 GFPT1Q06210 699 aaPredicted RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 ACAP1Q15027 740 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 LY6G5CQ5SRR4 150 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 TRMT11Q7Z4G4 463 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 RABEPKQ7Z6M1 372 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 WDR49Q8IV35 697 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 ZNF513Q8N8E2 541 aaPredicted RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 OTUB2Q96DC9 234 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 MRPL45Q9BRJ2 306 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 GTPBP2Q9BX10 602 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 SNX25Q9H3E2 840 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 PANK4Q9NVE7 773 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 NME7Q9Y5B8 376 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 SRPRBQ9Y5M8 271 aaKnown RBP9.23□□□□□ -0.93
CHD2-212ENST00000627622 CLIC4Q9Y696 253 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 PTPRBP23467 1997 aa9.23□□□□□ -0.93
CHD2-212ENST00000627622 OPHN1O60890 802 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 TACC1O75410 805 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 CD2BP2O95400 341 aaKnown RBP9.22□□□□□ -0.93
CHD2-212ENST00000627622 FAM163BP0C2L3 166 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 PTPN1P18031 435 aaKnown RBP9.22□□□□□ -0.93
CHD2-212ENST00000627622 GABRG2P18507 467 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 YWHAQP27348 245 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 CACNA2D1P54289 1103 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 ZNF33AQ06730 810 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 IFRD2Q12894 506 aaPredicted RBP9.22□□□□□ -0.93
CHD2-212ENST00000627622 ERICH6BQ5W0A0 696 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 BTBD8Q5XKL5 378 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 NUDT18Q6ZVK8 323 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 TRAPPC11Q7Z392 1133 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 CBWD2Q8IUF1 395 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 NUP93Q8N1F7 819 aa9.22□□□□□ -0.93
CHD2-212ENST00000627622 NAT16Q8N8M0 369 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms