RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MAGEA4P43358 317 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 MMP13P45452 471 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 GDF10P55107 478 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 NKX3-2P78367 333 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 TFDP2Q14188 446 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 PDK2Q15119 407 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 FAM47CQ5HY64 1035 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SCYL2Q6P3W7 929 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 SERINC5Q86VE9 423 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 MAP7D3Q8IWC1 876 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 RSAD2Q8WXG1 361 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 TBCBQ99426 244 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 C10orf88Q9H8K7 445 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 RSPH14Q9UHP6 348 aa18.96■□□□□ 0.63
SMPD3-211ENST00000568373 NDUFAB1O14561 156 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 TCEA3O75764 348 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 CHRNA1P02708 482 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 CTSHP09668 335 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 ACADSBP45954 432 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 EIF3EP60228 445 aaKnown RBP18.95■□□□□ 0.62
SMPD3-211ENST00000568373 PPARDQ03181 441 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 KRT81Q14533 505 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 ARCQ7LC44 396 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 PCGF5Q86SE9 256 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 OSTM1Q86WC4 334 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 B3GALNT2Q8NCR0 500 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 SPATA18Q8TC71 538 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 HSFY1Q96LI6 401 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 C9orf72Q96LT7 481 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 CHST12Q9NRB3 414 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 SLC38A7Q9NVC3 462 aa18.95■□□□□ 0.62
SMPD3-211ENST00000568373 MEIS3P2A8K0S8 358 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 CAPN15O75808 1086 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 PTPN9P43378 593 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 CCT5P48643 541 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 HDAC4P56524 1084 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 HACE1Q8IYU2 909 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 CLEC4CQ8WTT0 213 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 RNF157Q96PX1 679 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 SAYSD1Q9NPB0 183 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 FARP1Q9Y4F1 1045 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-211ENST00000568373 CYB561D2O14569 222 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 MDM4O15151 490 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 ABHD2P08910 425 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 FAM163BP0C2L3 166 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 RBP3P10745 1247 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 LCP1P13796 627 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 TKTP29401 623 aaKnown RBP18.94■□□□□ 0.62
SMPD3-211ENST00000568373 MLH1P40692 756 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 SEC24CP53992 1094 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 NOMO1Q15155 1222 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 CYP4F22Q6NT55 531 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 PAXIP1Q6ZW49 1069 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-211ENST00000568373 RPAINQ86UA6 219 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 GSTCDQ8NEC7 633 aa18.94■□□□□ 0.62
SMPD3-211ENST00000568373 PRCCQ92733 491 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-211ENST00000568373 C11orf84Q9BUA3 381 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-211ENST00000568373 ADAMTS4O75173 837 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 RPLP2P05387 115 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 IL4RP24394 825 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 CTCFP49711 727 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 PRKCZQ05513 592 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 MGAT3Q09327 533 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TRIM32Q13049 653 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 ZC3H12AQ5D1E8 599 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 NLRP14Q86W24 1093 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 VSIG1Q86XK7 387 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 UNC45BQ8IWX7 931 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 MDM1Q8TC05 714 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 P3H4Q92791 437 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 HNRNPABQ99729 332 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 SNRNP25Q9BV90 132 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TSPYL2Q9H2G4 693 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 PCDH18Q9HCL0 1135 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 PPANQ9NQ55 473 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 GPATCH2LQ9NWQ4 482 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 E7EVH7 732 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 XPO1O14980 1071 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TRAPPC3O43617 180 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 RPL22P35268 128 aaKnown RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 CCDC142Q17RM4 750 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 WSCD1Q658N2 575 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 NPNTQ6UXI9 565 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TAOK1Q7L7X3 1001 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 PPIL6Q8IXY8 311 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 FUKQ8N0W3 1084 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 MYCBPAPQ8TBZ2 947 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 CENPIQ92674 756 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-211ENST00000568373 CENPTQ96BT3 561 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 TTC25Q96NG3 672 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 GAD1Q99259 594 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 SELENOSQ9BQE4 189 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 XPNPEP3Q9NQH7 507 aa18.93■□□□□ 0.62
SMPD3-211ENST00000568373 GABRDO14764 452 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 ATP2C2O75185 946 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 TFE3P19532 575 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-211ENST00000568373 ATP5DP30049 168 aa18.92■□□□□ 0.62
SMPD3-211ENST00000568373 RDXP35241 583 aaKnown RBP18.92■□□□□ 0.62
SMPD3-211ENST00000568373 ROR1Q01973 937 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms