RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HDCP19113 662 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 MAPK8P45983 427 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 IFNAR2P48551 515 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 DHPSP49366 369 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 CASP4P49662 377 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ATP1A2P50993 1020 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 NOVA1P51513 510 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 IRX4P78413 519 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 RABEP1Q15276 862 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 SV2CQ496J9 727 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 L1TD1Q5T7N2 865 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 RRAGBQ5VZM2 374 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 RNF43Q68DV7 783 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 FILIP1Q7Z7B0 1213 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 BRSK2Q8IWQ3 736 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 NELFCDQ8IXH7 590 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 TMEFF1Q8IYR6 380 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 DCP1BQ8IZD4 617 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ALLCQ8N6M5 410 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 SPPL2BQ8TCT7 592 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 CD101Q93033 1021 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 USP28Q96RU2 1077 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 MMS19Q96T76 1030 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 EDEM2Q9BV94 578 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 KLF16Q9BXK1 252 aaPredicted RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ZNF518BQ9C0D4 1074 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 SLC6A17Q9H1V8 727 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ASB7Q9H672 318 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 ZFAND3Q9H8U3 227 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 TMEM74BQ9NUR3 256 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 PANK4Q9NVE7 773 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 KCND2Q9NZV8 630 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 GCNT4Q9P109 453 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 NOVA2Q9UNW9 492 aaKnown RBP7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 C2CD2Q9Y426 696 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 BAHCC1Q9P281 2608 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 MYO16Q9Y6X6 1858 aa7.32□□□□□ -1.24
PRPF40B-214ENST00000551320 CELSR3Q9NYQ7 3312 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 GREB1Q4ZG55 1949 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 ANAPC1Q9H1A4 1944 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 ASCC3Q8N3C0 2202 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 TRAV19A0A0A6YYK7 116 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 LNP1A1A4G5 178 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 F8VP50 259 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 H0YCG3 227 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SGK1O00141 431 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 NOL4O94818 638 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 KLF8O95600 359 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CAVIN2O95810 425 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CYP17A1P05093 508 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CSH1P0DML2 217 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CSH2P0DML3 217 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 DLATP10515 647 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 TIMP2P16035 220 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 PMLP29590 882 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 LONP1P36776 959 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 GRIK1P39086 918 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 PTGER3P43115 390 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CYP2J2P51589 502 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CDH8P55286 799 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 FAM193AP78312 1265 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 RESTQ13127 1097 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CBLBQ13191 982 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SH3PXD2AQ5TCZ1 1133 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SLFN12LQ6IEE8 588 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SCARA5Q6ZMJ2 495 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SV2BQ7L1I2 683 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 HS2ST1Q7LGA3 356 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 MIB1Q86YT6 1006 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CD302Q8IX05 232 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 DEFB124Q8NES8 71 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 MDGA1Q8NFP4 955 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 TSTD1Q8NFU3 115 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SCAMP5Q8TAC9 235 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 PLEKHO2Q8TD55 490 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 USP33Q8TEY7 942 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 OSCP1Q8WVF1 389 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 PIGKQ92643 395 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 BHMTQ93088 406 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 JAKMIP2Q96AA8 810 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CCDC127Q96BQ5 260 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 P2RY11Q96G91 374 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 HPDLQ96IR7 371 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 AK8Q96MA6 479 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 ACCSQ96QU6 501 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 KCNK16Q96T55 309 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 SYT15Q9BQS2 421 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 BLZF1Q9H2G9 400 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 OBP2AQ9NY56 170 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CFAP97Q9P2B7 532 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 CHORDC1Q9UHD1 332 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 MBD1Q9UIS9 605 aaPredicted RBP7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 ANGPTL2Q9UKU9 493 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 DSEQ9UL01 958 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 DERAQ9Y315 318 aa7.31□□□□□ -1.24
PRPF40B-214ENST00000551320 THADAQ6YHU6 1953 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms