RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	SFTPA1	Q8IWL2	248 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	ETFBKMT	Q8IXQ9	262 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	TERB1	Q8NA31	727 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	GLIS3	Q8NEA6	775 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	PDZD8	Q8NEN9	1154 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	CXorf38	Q8TB03	319 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	OVCA2	Q8WZ82	227 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	HSPA12B	Q96MM6	686 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	SLITRK1	Q96PX8	696 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	ZHX3	Q9H4I2	956 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	RBAK	Q9NYW8	714 aa	Predicted RBP	13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	CFAP97	Q9P2B7	532 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	SEL1L	Q9UBV2	794 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	STARD13	Q9Y3M8	1113 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	NFE2L3	Q9Y4A8	694 aa		13.26	□□□□□ -0.29
CAPN1-223	ENST00000533079	CEP192	Q8TEP8	1941 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	TBC1D3B	A6NDS4	549 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	PPP1R37	O75864	691 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	TMEM191B	P0C7N4	346 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	ADSS	P30520	456 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	NTSR1	P30989	418 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	RBP5	P82980	135 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	CCDC142	Q17RM4	750 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	SOWAHA	Q2M3V2	549 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	WDR45B	Q5MNZ6	344 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	EMC10	Q5UCC4	262 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	LIMS2	Q7Z4I7	341 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	SLC41A1	Q8IVJ1	513 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	CSGALNACT2	Q8N6G5	542 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	KRI1	Q8N9T8	703 aa	Known RBP	13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	TRIML1	Q8N9V2	468 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	LARP4B	Q92615	738 aa	Known RBP	13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	RAD54L	Q92698	747 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	C8orf48	Q96LL4	319 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	FAM213A	Q9BRX8	229 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	RNF38	Q9H0F5	515 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	BLOC1S4	Q9NUP1	217 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	DEC1	Q9P2X7	70 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	ADAMTS9	Q9P2N4	1935 aa		13.25	□□□□□ -0.29
CAPN1-223	ENST00000533079	ASH1L	Q9NR48	2969 aa	Known RBP	13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	SETX	Q7Z333	2677 aa	Known RBP	13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	NDUFS2	O75306	463 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	KRT19	P08727	400 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	ZNF883	P0CG24	379 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	BDNF	P23560	247 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	USP46	P62068	366 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	CYP27A1	Q02318	531 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	GRIK2	Q13002	908 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	DHX8	Q14562	1220 aa	Known RBP	13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	LY6G5C	Q5SRR4	150 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	C10orf76	Q5T2E6	689 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	TDRD10	Q5VZ19	366 aa	Known RBP	13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	SDE2	Q6IQ49	451 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	ZNF720	Q7Z2F6	126 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	RGL4	Q8IZJ4	473 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	OR2I1P	Q8NGU4	316 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	RASSF8	Q8NHQ8	419 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	MYCBPAP	Q8TBZ2	947 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	MDM1	Q8TC05	714 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	PCED1B	Q96HM7	432 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	TMX3	Q96JJ7	454 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	CAMK1G	Q96NX5	476 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	SMPD4	Q9NXE4	827 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079	PCOLCE2	Q9UKZ9	415 aa		13.24	□□□□□ -0.29
CAPN1-223	ENST00000533079		A0A1W2PQF6	199 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	CBFA2T3	O75081	653 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	TULP3	O75386	442 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	HSP90AA1	P07900	732 aa	Known RBP	13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	MBL2	P11226	248 aa	Predicted RBP	13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	PLCG1	P19174	1290 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	NDUFV2	P19404	249 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	GART	P22102	1010 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	WARS	P23381	471 aa	Known RBP	13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	LONP1	P36776	959 aa	Known RBP	13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	TUB	P50607	506 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	WNT7B	P56706	349 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	PSMC1	P62191	440 aa	Known RBP	13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	ALCAM	Q13740	583 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	MCM6	Q14566	821 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	TMPRSS7	Q7RTY8	843 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	GALNT15	Q8N3T1	639 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	KBTBD7	Q8WVZ9	684 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	ANKRD36BP1	Q96IX9	119 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	GABRG3	Q99928	467 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	STRA6	Q9BX79	667 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	MTMR12	Q9C0I1	747 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	ELOVL4	Q9GZR5	314 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	CD248	Q9HCU0	757 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	ZDHHC4	Q9NPG8	344 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	CRTAC1	Q9NQ79	661 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	SPHK2	Q9NRA0	654 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	CACNA2D2	Q9NY47	1150 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	SIX4	Q9UIU6	781 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	CYP8B1	Q9UNU6	501 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079	RAX	Q9Y2V3	346 aa		13.23	□□□□□ -0.29
CAPN1-223	ENST00000533079		A0A087WV48	116 aa		13.22	□□□□□ -0.29
CAPN1-223	ENST00000533079		A0A1B0GTW7	788 aa		13.22	□□□□□ -0.29
CAPN1-223	ENST00000533079		F8VP50	259 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms