RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	TMEM232	C9JQI7	657 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	FCHO1	O14526	889 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	UBXN7	O94888	489 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	NTN1	O95631	604 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	FGA	P02671	866 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	NPR1	P16066	1061 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	HSPA6	P17066	643 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	PRKAR1B	P31321	381 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	SUMO2	P61956	95 aa	Known RBP	4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	SLC13A2	Q13183	592 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	PTCHD3	Q3KNS1	767 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	CERCAM	Q5T4B2	595 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	SHC4	Q6S5L8	630 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF813	Q6ZN06	617 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	MRPL10	Q7Z7H8	261 aa	Known RBP	4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	KRT73	Q86Y46	540 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	CUL5	Q93034	780 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	RSPRY1	Q96DX4	576 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	PNMA2	Q9UL42	364 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	AFG3L2	Q9Y4W6	797 aa		4.04	□□□□□ -1.76
VPS36-205	ENST00000492650	MYMK	A6NI61	221 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650		H3BML4	177 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	SOCS2	O14508	198 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	CAND2	O75155	1236 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	PMPCB	O75439	489 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	ALDH1L1	O75891	902 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	ABLIM3	O94929	683 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	FGB	P02675	491 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	SNHG28	P0DPA3	235 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	HOXB6	P17509	224 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	GK	P32189	559 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	GNAL	P38405	381 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	COPB1	P53618	953 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	PSG6	Q00889	435 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	GHRHR	Q02643	423 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	OS9	Q13438	667 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	RAB32	Q13637	225 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	CCNI	Q14094	377 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	C11orf96	Q7Z7L8	435 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	RAB11FIP4	Q86YS3	637 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	SFTPA1	Q8IWL2	248 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	RAVER1	Q8IY67	606 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	PPP1R35	Q8TAP8	253 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	JPH3	Q8WXH2	748 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	TSR2	Q969E8	191 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	ACO2	Q99798	780 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	NMRK2	Q9NPI5	230 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	ASIC5	Q9NY37	505 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	LPAR3	Q9UBY5	353 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	ZNF180	Q9UJW8	692 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	USP22	Q9UPT9	525 aa		4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	DRG1	Q9Y295	367 aa	Known RBP	4.03	□□□□□ -1.76
VPS36-205	ENST00000492650	BTBD19	C9JJ37	291 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	ADAM10	O14672	748 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	PLIN1	O60240	522 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	RNF8	O76064	485 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	A1BG	P04217	495 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	PHKG2	P15735	406 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	ARFIP2	P53365	341 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	FOXG1	P55316	489 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	HDAC1	Q13547	482 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	NFE2	Q16621	373 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	MEX3C	Q5U5Q3	659 aa	Known RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	TMEM65	Q6PI78	240 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	CLEC4G	Q6UXB4	293 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	WDR75	Q8IWA0	830 aa	Known RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	TPH2	Q8IWU9	490 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	TMTC2	Q8N394	836 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	NRAC	Q8N912	160 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	OSR1	Q8TAX0	266 aa	Predicted RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	SLC35G2	Q8TBE7	412 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	DNAJB14	Q8TBM8	379 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	PIGO	Q8TEQ8	1089 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	SLC39A13	Q96H72	371 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	RHOBTB2	Q9BYZ6	727 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	ZMAT3	Q9HA38	289 aa	Known RBP	4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	PI4KB	Q9UBF8	816 aa		4.02	□□□□□ -1.77
VPS36-205	ENST00000492650	CCDC189	A1A4V9	331 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	INSIG1	O15503	277 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	PHGDH	O43175	533 aa	Known RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	TSPAN6	O43657	245 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	RGS10	O43665	173 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	WDHD1	O75717	1129 aa	Predicted RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	RASAL1	O95294	804 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	MT-CO3	P00414	261 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	MYB	P10242	640 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	CREB1	P16220	341 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	TKT	P29401	623 aa	Known RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	SLC7A1	P30825	629 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	MTHFS	P49914	203 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	BCAT1	P54687	386 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	EPHB1	P54762	984 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	LMAN2	Q12907	356 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	FOXD4	Q12950	439 aa	Predicted RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	PIN1	Q13526	163 aa	Predicted RBP	4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	AWAT1	Q58HT5	328 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	DCAF12L1	Q5VU92	463 aa		4.01	□□□□□ -1.77
VPS36-205	ENST00000492650	CACHD1	Q5VU97	1274 aa		4.01	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms