RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 THEGQ9P2T0 379 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 GOLGA4Q13439 2230 aaKnown RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 DNAJC6O75061 913 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ZFXP17010 805 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 PNPLA4P41247 253 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 RPL7AP62424 266 aaKnown RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 TSTA3Q13630 321 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 EFHC1Q5JVL4 640 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 HDAC11Q96DB2 347 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 PCDHB18PQ96TA0 734 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 THTPAQ9BU02 230 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 CEP41Q9BYV8 373 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ZNF711Q9Y462 761 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 N4BP2Q86UW6 1770 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 MANSC4A6NHS7 340 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 E5RJQ4 531 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 GPC4O75487 556 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 MICAL2O94851 1124 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 EIF4BP23588 611 aaKnown RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 TNFRSF8P28908 595 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 HIRAP54198 1017 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 CENPCQ03188 943 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 MMEL1Q495T6 779 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 IQSEC1Q6DN90 963 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 SYDE1Q6ZW31 735 aaPredicted RBP11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ARHGAP18Q8N392 663 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 UMODL1Q5DID0 1318 aa11.75□□□□□ -0.53
SMPD4-218ENST00000482171 ARF4P18085 180 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 PRUNE1Q86TP1 453 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 RNF135Q8IUD6 432 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 EDEM1Q92611 657 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ALG3Q92685 438 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 BHMTQ93088 406 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TMEM237Q96Q45 408 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TRIM56Q9BRZ2 755 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 CDC42EP4Q9H3Q1 356 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 SP110Q9HB58 689 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 AJAP1Q9UKB5 411 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 RARGP13631 454 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 AKR1A1P14550 325 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TYK2P29597 1187 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 VHLP40337 213 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ACCSLQ4AC99 568 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 MIB1Q86YT6 1006 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 SLC2A14Q8TDB8 520 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 CNPY3Q9BT09 278 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ZNF518BQ9C0D4 1074 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 KRT82Q9NSB4 513 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TSR3Q9UJK0 312 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 PHTF1Q9UMS5 762 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 MYH6P13533 1939 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 B2RBV5 119 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 DNAJC8O75937 253 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 CCDC130P13994 396 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ACADSBP45954 432 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ESRRGP62508 458 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 FSTL1Q12841 308 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 CD302Q8IX05 232 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 EIF1ADQ8N9N8 165 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 EXD1Q8NHP7 514 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 ZNF512Q96ME7 567 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TEPSINQ96N21 525 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TSPYL2Q9H2G4 693 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 XPNPEP3Q9NQH7 507 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 A0A0B4J269 797 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 GOLGA8CPA6NN73 597 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 GPR182O15218 404 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 SP2Q02086 613 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 MED21Q13503 144 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 PCSK7Q16549 785 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 NFIL3Q16649 462 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 C15orf59Q2T9L4 293 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 C12orf29Q8N999 325 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 SERPINB12Q96P63 405 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 TSSK1BQ9BXA7 367 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 DDX43Q9NXZ2 648 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 APOBEC2Q9Y235 224 aaKnown RBP11.74□□□□□ -0.53
SMPD4-218ENST00000482171 PCDHA3Q9Y5H8 950 aa11.74□□□□□ -0.53
SMPD4-218ENST00000482171 C4BP0C0L5 1744 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 LSM8O95777 96 aaKnown RBP11.73□□□□□ -0.53
SMPD4-218ENST00000482171 SHBGP04278 402 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 ZSCAN5DPP0CG00 497 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 BCAT1P54687 386 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 RBPJLQ9UBG7 517 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 ITGA11Q9UKX5 1188 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 SMG5Q9UPR3 1016 aaKnown RBP11.73□□□□□ -0.53
SMPD4-218ENST00000482171 MROH7Q68CQ1 1323 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 SMIM10L2AP0DMW4 78 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 SMIM10L2BP0DMW5 78 aa11.73□□□□□ -0.53
SMPD4-218ENST00000482171 ADSSP30520 456 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms