RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NDFIP2Q9NV92 336 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 AAR2Q9Y312 384 aaKnown RBP14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SH3BP1Q9Y3L3 701 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 SLC30A1Q9Y6M5 507 aa14.31□□□□□ -0.12
BRAT1-203ENST00000467558 CYP1A2P05177 515 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SMIM10L2AP0DMW4 78 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SMIM10L2BP0DMW5 78 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 TGM2P21980 687 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 GEMP55040 296 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 FAM110CQ1W6H9 321 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ANKRD20A4Q4UJ75 823 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ANKRD20A8PQ5CZ79 823 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ANKRD20A2Q5SQ80 823 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ANKRD20A1Q5TYW2 823 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 CXCL17Q6UXB2 119 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SNED1Q8TER0 1413 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SEC16BQ96JE7 1060 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 C2CD2LO14523 706 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 HNRNPCL1O60812 293 aaKnown RBP14.3□□□□□ -0.12
BRAT1-203ENST00000467558 CYP2F1P24903 491 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 DUSP28Q4G0W2 176 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 TMEM139Q8IV31 216 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SEMA4AQ9H3S1 761 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ECT2Q9H8V3 914 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ABCF3Q9NUQ8 709 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF263O14978 683 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 PMPCBO75439 489 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 NDUFS3O75489 264 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 TRPA1O75762 1119 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 ASS1P00966 412 aaKnown RBP14.3□□□□□ -0.12
BRAT1-203ENST00000467558 GFAPP14136 432 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 MIPP30301 263 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 TNFSF9P41273 254 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 MROH9Q5TGP6 573 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 DENND5BQ6ZUT9 1274 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 TMEM86AQ8N2M4 240 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 PPTC7Q8NI37 304 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 GAD1Q99259 594 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
BRAT1-203ENST00000467558 NCANO14594 1321 aa14.3□□□□□ -0.12
BRAT1-203ENST00000467558 E5RJQ4 531 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 EGFRP00533 1210 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 KRT4P19013 534 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TIGD7Q6NT04 549 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 SLC25A41Q8N5S1 370 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 SMARCD1Q96GM5 515 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TASP1Q9H6P5 420 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 MRPL40Q9NQ50 206 aaKnown RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 NOP53Q9NZM5 478 aaKnown RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 SIGLEC16A6NMB1 481 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 F8VP50 259 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 PDE2AO00408 941 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 MAP3K7O43318 606 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 CABYRO75952 493 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TRADDQ15628 312 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 LRRC38Q5VT99 294 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 EEF1DP3Q658K8 133 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 MDM1Q8TC05 714 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 NIFKQ9BYG3 293 aaKnown RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TLR2O60603 784 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 CAND2O75155 1236 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 MAMLD1Q13495 774 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 PTK6Q13882 451 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 DRC3Q9H069 523 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 HMX1Q9NP08 348 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 NPHS2Q9NP85 383 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 PDGFCQ9NRA1 345 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 ARHGAP28Q9P2N2 729 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 SLC24A2Q9UI40 661 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 ZNF214Q9UL59 606 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 KIF3CO14782 793 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 CHUKO15111 745 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 GSTA4O15217 222 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TOMM70O94826 608 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TWF1Q12792 350 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 TTC23LQ6PF05 361 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 NUDT18Q6ZVK8 323 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 SENP8Q96LD8 212 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 APBA2Q99767 749 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 HAUS8Q9BT25 410 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 DMAP1Q9NPF5 467 aaPredicted RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 GDF3Q9NR23 364 aa14.29□□□□□ -0.12
BRAT1-203ENST00000467558 REXO2Q9Y3B8 237 aaKnown RBP14.29□□□□□ -0.12
BRAT1-203ENST00000467558 DNALI1O14645 258 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 RPSAP08865 295 aaKnown RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 IRF1P10914 325 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 RPL21P46778 160 aaKnown RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 ELMO2Q96JJ3 720 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 FBXO44Q9H4M3 255 aa14.28□□□□□ -0.12
BRAT1-203ENST00000467558 DHX33Q9H6R0 707 aaKnown RBP14.28□□□□□ -0.12
BRAT1-203ENST00000467558 LRRC40Q9H9A6 602 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms