RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 NSFP46459 744 aaKnown RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 TUBP50607 506 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 KIF11P52732 1056 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CACNA2D1P54289 1103 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 JAM2P57087 298 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CDR2Q01850 454 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZP2Q05996 745 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 KLHL30Q0D2K2 578 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 PDCLQ13371 301 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 HECTD3Q5T447 861 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 TAF3Q5VWG9 929 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 BTBD8Q5XKL5 378 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CC2D1AQ6P1N0 951 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 GAREM2Q75VX8 874 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CCDC186Q7Z3E2 898 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 TTC30AQ86WT1 665 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ERICH1Q86X53 443 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 TMC8Q8IU68 726 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZDHHC17Q8IUH5 632 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 PASD1Q8IV76 773 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 NPAS3Q8IXF0 933 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 GJD3Q8N144 294 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 MAB21L3Q8N8X9 362 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZMIZ2Q8NF64 920 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SHKBP1Q8TBC3 707 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ADAMTS19Q8TE59 1207 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 DEPDC1BQ8WUY9 529 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SLC35F5Q8WV83 523 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 IRGQQ8WZA9 623 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SYN2Q92777 582 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SMARCD2Q92925 531 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SECISBP2LQ93073 1101 aaKnown RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 FAM149B1Q96BN6 582 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 PPP1R13BQ96KQ4 1090 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 UHRF1Q96T88 793 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 DEF6Q9H4E7 631 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZNF334Q9HCZ1 680 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 THG1LQ9NWX6 298 aaKnown RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 EPS15L1Q9UBC2 864 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 AJAP1Q9UKB5 411 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CAPN11Q9UMQ6 739 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 SCML2Q9UQR0 700 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 MIA3Q5JRA6 1907 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 TICRRQ7Z2Z1 1910 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 FAM92AA1XBS5 289 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ANKRD62A6NC57 917 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 GOLGA6L3A6NEY3 463 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 LOC730098B7Z3J9 87 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TNFRSF10BO14763 440 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 EPHB6O15197 1021 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 NRDCO43847 1150 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 F11P03951 625 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SERPING1P05155 500 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 MBL2P11226 248 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 GJA1P17302 382 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CASP14P31944 242 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ATP5C1P36542 298 aaKnown RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 PBX1P40424 430 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 GPD2P43304 727 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 RGS7P49802 495 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 YWHAGP61981 247 aaKnown RBP eCLIP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 USP46P62068 366 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CYP4F8P98187 520 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SLC5A9Q2M3M2 681 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 PKDCCQ504Y2 493 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 RAB41Q5JT25 222 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 EFHC1Q5JVL4 640 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 C10orf120Q5SQS8 335 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TXNDC8Q6A555 127 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 OR6B2Q6IFH4 312 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 DPY19L2P1Q6NXN4 242 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 PMF1Q6P1K2 205 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 DENND1BQ6P3S1 775 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TMC6Q7Z403 805 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 NOP9Q86U38 636 aaKnown RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ARID3BQ8IVW6 561 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 VSTM4Q8IW00 320 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CMTM8Q8IZV2 173 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SCML4Q8N228 414 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 CELF5Q8N6W0 485 aaKnown RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 C1orf131Q8NDD1 294 aaKnown RBP6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TTC16Q8NEE8 873 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 OR8K1Q8NGG5 319 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 SCAMP5Q8TAC9 235 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ITFG1Q8TB96 612 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 EXOC4Q96A65 974 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ELSPBP1Q96BH3 223 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 C18orf8Q96DM3 657 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 TCEAL4Q96EI5 215 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 MYADMQ96S97 322 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 AGPAT1Q99943 283 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 LRRC3Q9BY71 257 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 ULBP1Q9BZM6 244 aa6.7□□□□□ -1.34
SF3B1-206ENST00000462613 IL21Q9HBE4 155 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms