RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 DCLRE1CQ96SD1 692 aaKnown RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 SENP6Q9GZR1 1112 aaPredicted RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ITM2CQ9NQX7 267 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 LANCL2Q9NS86 450 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 TRPM5Q9NZQ8 1165 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 AJAP1Q9UKB5 411 aaPredicted RBP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ITGB4P16144 1822 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 ANKRD26Q9UPS8 1709 aa5.06□□□□□ -1.6
LINC00393-202ENST00000452852 CGNL1Q0VF96 1302 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MAP3K19Q56UN5 1328 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TAF1LQ8IZX4 1826 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 A0A1W2PPC4 97 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 NT5C1B-RDH14C9J2C7 533 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 F2RL2O00254 374 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PLA2G6O60733 806 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 THP07101 528 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 ADH4P08319 380 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 SNRPA1P09661 255 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 RAP2AP10114 183 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 EN2P19622 333 aaPredicted RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 DDCP20711 480 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 FPR1P21462 350 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TNFAIP3P21580 790 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 FGFR2P21802 821 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MGAT1P26572 445 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 EEF1GP26641 437 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 ZFP36P26651 326 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PRDX5P30044 214 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PTGS2P35354 604 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 GEMIN4P57678 1058 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 CLRN1P58418 232 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 RAP2BP61225 183 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 EXOSC9Q06265 439 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 GRM1Q13255 1194 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 POSTNQ15063 836 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TAF5Q15542 800 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PFKFB4Q16877 469 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PRR16Q569H4 304 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 CRB2Q5IJ48 1285 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 ATXN7L2Q5T6C5 722 aaPredicted RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 AFMIDQ63HM1 303 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 GDF7Q7Z4P5 450 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PCGF5Q86SE9 256 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MRGPREQ86SM8 312 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 BRIX1Q8TDN6 353 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 LARP4BQ92615 738 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TNPO1Q92973 898 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MUL1Q969V5 352 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MRI1Q9BV20 369 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 COLEC11Q9BWP8 271 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 SORBS1Q9BX66 1292 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TEX101Q9BY14 249 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MRPL46Q9H2W6 279 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 WDCPQ9H6R7 721 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 OBP2BQ9NPH6 170 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 SLAMF7Q9NQ25 335 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 PIH1D1Q9NWS0 290 aaKnown RBP5.05□□□□□ -1.6
LINC00393-202ENST00000452852 TFCP2L1Q9NZI6 479 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 LRFN1Q9P244 771 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 SWAP70Q9UH65 585 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 CHST2Q9Y4C5 530 aa5.05□□□□□ -1.6
LINC00393-202ENST00000452852 MEGF6O75095 1541 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 COL24A1Q17RW2 1714 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PKD1L3Q7Z443 1732 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 DRGXA6NNA5 263 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 LGALS16A8MUM7 142 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF185O15231 689 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 SKAP2O75563 359 aaPredicted RBP5.04□□□□□ -1.6
LINC00393-202ENST00000452852 DHRS4L1P0CG22 281 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PCSK1P29120 753 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PHKA1P46020 1223 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 ALDH1A3P47895 512 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 CHN2P52757 468 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 SOX8P57073 446 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 RRS1Q15050 365 aaKnown RBP5.04□□□□□ -1.6
LINC00393-202ENST00000452852 DACT2Q5SW24 774 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 RRAGBQ5VZM2 374 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 METRNLQ641Q3 311 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 ZNF627Q7L945 461 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 CACNA2D3Q8IZS8 1091 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PPHLN1Q8NEY8 458 aaKnown RBP5.04□□□□□ -1.6
LINC00393-202ENST00000452852 MAML1Q92585 1016 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 LENG9Q96B70 501 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 SUCLG2Q96I99 432 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 PHACTR3Q96KR7 559 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 BRIP1Q9BX63 1249 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 SLC46A2Q9BY10 475 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 TRIM54Q9BYV2 358 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 MAGEH1Q9H213 219 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 TMEM140Q9NV12 185 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 MOCS1Q9NZB8 636 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 MYO1AQ9UBC5 1043 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 AFF4Q9UHB7 1163 aaKnown RBP5.04□□□□□ -1.6
LINC00393-202ENST00000452852 SLC39A10Q9ULF5 831 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 FZD1Q9UP38 647 aa5.04□□□□□ -1.6
LINC00393-202ENST00000452852 RUVBL1Q9Y265 456 aaKnown RBP5.04□□□□□ -1.6
LINC00393-202ENST00000452852 ACTL7AQ9Y615 435 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms