RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 USP49Q70CQ1 688 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 MAATS1Q7Z4T9 603 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 VRK3Q8IV63 474 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 LCORLQ8N3X6 602 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZNF384Q8TF68 577 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 ATG4AQ8WYN0 398 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 TM7SF3Q9NS93 570 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 RGL1Q9NZL6 768 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 SLC39A10Q9ULF5 831 aa5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 MAGED2Q9UNF1 606 aaPredicted RBP5.88□□□□□ -1.47
HMGB1P26-201ENST00000452520 MATN3O15232 486 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 NCAM2O15394 837 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 MPPED1O15442 326 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 CD3EAPO15446 510 aaKnown RBP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 FFAR2O15552 330 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 PEX1O43933 1283 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 IDEP14735 1019 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 TNFAIP3P21580 790 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 UQCRC1P31930 480 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 DDIT3P35638 169 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 FOLR3P41439 243 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 DDX10Q13206 875 aaKnown RBP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 TBX2Q13207 712 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 PTPRRQ15256 657 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 TBCCQ15814 346 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 LY6KQ17RY6 165 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 HYIQ5T013 277 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 CERCAMQ5T4B2 595 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 PGBD2Q6P3X8 592 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 USP17L6PQ6QN14 398 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZNF527Q8NB42 609 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 C18orf8Q96DM3 657 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 FBXL20Q96IG2 436 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZBTB45Q96K62 511 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 FAM227BQ96M60 508 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZBTB26Q9HCK0 441 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 KLC4Q9NSK0 619 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 SYBUQ9NX95 663 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZMYND8Q9ULU4 1186 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 HPSEQ9Y251 543 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 SNX14Q9Y5W7 946 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 MAST3O60307 1309 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ADGRA2Q96PE1 1338 aa5.87□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 VWC2LB2RUY7 222 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 PODXLO00592 558 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 RNASEH2AO75792 299 aaKnown RBP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 ZNF202O95125 648 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 RHOP08100 348 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 HKR1P10072 659 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 HGFP14210 728 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 VEGFAP15692 232 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 TGM1P22735 817 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 PDIA3P30101 505 aaKnown RBP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 ALDH9A1P49189 494 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 ATXN1P54253 815 aaKnown RBP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 GRM1Q13255 1194 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 PUM1Q14671 1186 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 RAP1GAP2Q684P5 730 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 KIAA0895LQ68EN5 471 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 GGT6Q6P531 493 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 FBXO38Q6PIJ6 1188 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 CRIP3Q6Q6R5 217 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 Q6ZNX1 250 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 MAVSQ7Z434 540 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 KRT73Q86Y46 540 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 ULK2Q8IYT8 1036 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 IZUMO1Q8IYV9 350 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 CACNA2D3Q8IZS8 1091 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 ATRIPQ8WXE1 791 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 LINC00476Q8WZB0 136 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 GLG1Q92896 1179 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 MUL1Q969V5 352 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 FKBP10Q96AY3 582 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 TBC1D20Q96BZ9 403 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 COQ10AQ96MF6 247 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 C17orf80Q9BSJ5 609 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 CYP4F11Q9HBI6 524 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 NECTIN3Q9NQS3 549 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 DKK3Q9UBP4 350 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 GRHPRQ9UBQ7 328 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 EPN1Q9Y6I3 576 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 KAT6BQ8WYB5 2073 aa5.86□□□□□ -1.47
HMGB1P26-201ENST00000452520 A1L4Q6 167 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 WDR27A2RRH5 827 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 ADM5C9JUS6 153 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 J3KRW8 73 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 SLC16A3O15427 465 aaKnown RBP5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 COQ9O75208 318 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 TNFRSF1AP19438 455 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 MPLP40238 635 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 GATMP50440 423 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 PGDP52209 483 aa5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 GALNT1Q10472 559 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 EIF2B5Q13144 721 aaKnown RBP5.85□□□□□ -1.47
HMGB1P26-201ENST00000452520 RAB30Q15771 203 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms