RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 NUDT18Q6ZVK8 323 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 BRAPQ7Z569 592 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 ZNF513Q8N8E2 541 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 MRPL45Q9BRJ2 306 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 TTLL2Q9BWV7 592 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 SH3BP1Q9Y3L3 701 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 FAM208BQ5VWN6 2430 aa19.19■□□□□ 0.66
CHCHD3-203ENST00000448878 PTPRDP23468 1912 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 CLSTN1O94985 981 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 ZNF33AQ06730 810 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 PREPLQ4J6C6 727 aaPredicted RBP19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 C10orf76Q5T2E6 689 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 SLC36A4Q6YBV0 504 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 TRMT11Q7Z4G4 463 aaKnown RBP19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 PIP4P1Q86T03 277 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 MINDY1Q8N5J2 469 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 RDH13Q8NBN7 331 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 OR2I1PQ8NGU4 316 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 FBXO32Q969P5 355 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 C8orf48Q96LL4 319 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 FGFBP2Q9BYJ0 223 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 OLFML3Q9NRN5 406 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 DEC1Q9P2X7 70 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 CHORDC1Q9UHD1 332 aaPredicted RBP19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 CLIC4Q9Y696 253 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 PTPRJQ12913 1337 aa19.18■□□□□ 0.66
CHCHD3-203ENST00000448878 ADAMTS9Q9P2N4 1935 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 A0A0A0MRY4 1105 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 VPS37CA5D8V6 355 aaPredicted RBP19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 H0Y626 953 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 TRIM16O95361 564 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 OAS1P00973 400 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 SERPINF2P08697 491 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 HOXB2P14652 356 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 PTPN1P18031 435 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 YWHAQP27348 245 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 FAM193AP78312 1265 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 CEBPZQ03701 1054 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 CBWD2Q8IUF1 395 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 RGL4Q8IZJ4 473 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 KIAA1958Q8N8K9 716 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 CLIC6Q96NY7 704 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 NACA2Q9H009 215 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 CALCOCO1Q9P1Z2 691 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 PCDHB9Q9Y5E1 797 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 SPEGQ15772 3267 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 ZZEF1O43149 2961 aa19.17■□□□□ 0.66
CHCHD3-203ENST00000448878 BAHCC1Q9P281 2608 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 E2F8A0AVK6 867 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 CLDN5O00501 218 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 KIAA0391O15091 583 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 OLFM2O95897 454 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 DLATP10515 647 aaKnown RBP19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 IRF1P10914 325 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 GABRG2P18507 467 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 TNNI1P19237 187 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 HOXD12P35452 270 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 STAT6P42226 847 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 CACNA2D1P54289 1103 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 TNNC1P63316 161 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 SDE2Q6IQ49 451 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 TRAPPC11Q7Z392 1133 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 NUP93Q8N1F7 819 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 ZNF518BQ9C0D4 1074 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 ELOVL4Q9GZR5 314 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 DPEP3Q9H4B8 488 aa19.16■□□□□ 0.66
CHCHD3-203ENST00000448878 AKAP13Q12802 2813 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 ASCC3Q8N3C0 2202 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 A8MXQ7 604 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 UPK3BL1B0FP48 263 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 UPK3BL2E5RIL1 263 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 ARHGAP33O14559 1287 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 COCHO43405 550 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 TULP3O75386 442 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 CST3P01034 146 aaPredicted RBP19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 SYPP08247 313 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 WDR72Q3MJ13 1102 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 CCDC73Q6ZRK6 1079 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 STXBP4Q6ZWJ1 553 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 LIMS2Q7Z4I7 341 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 RABEPKQ7Z6M1 372 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 WDR49Q8IV35 697 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 CCDC65Q8IXS2 484 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 PDZD8Q8NEN9 1154 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 OTUB2Q96DC9 234 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 MED10Q9BTT4 135 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 CYP8B1Q9UNU6 501 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 TNRC6BQ9UPQ9 1833 aaKnown RBP19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 MYOFQ9NZM1 2061 aa19.15■□□□□ 0.66
CHCHD3-203ENST00000448878 NDUFS2O75306 463 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 RTN3O95197 1032 aaPredicted RBP19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 NTSR1P30989 418 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 ZNF423Q2M1K9 1284 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 PLEKHG6Q3KR16 790 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 HECTD3Q5T447 861 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 C19orf48Q6RUI8 117 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 TMEM25Q86YD3 366 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 BBS7Q8IWZ6 715 aa19.14■□□□□ 0.65
CHCHD3-203ENST00000448878 TRIML1Q8N9V2 468 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms