RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SCPEP1Q9HB40 452 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 AVENQ9NQS1 362 aaPredicted RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 MAFFQ9ULX9 164 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 GNEQ9Y223 722 aaKnown RBP11.16□□□□□ -0.62
LINC00342-202ENST00000448494 RWDD3Q9Y3V2 267 aa11.16□□□□□ -0.62
LINC00342-202ENST00000448494 CHD4Q14839 1912 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 FAM205CA6NFA0 338 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 A8MU76 341 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 H0YC42 278 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 TYROBPO43914 113 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 POLR2BP30876 1174 aaKnown RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 HOXA7P31268 230 aaPredicted RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 TPD52P55327 224 aaPredicted RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ARL4CP56559 192 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 MRPS9P82933 396 aaKnown RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 GK3PQ14409 553 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 CCNJQ5T5M9 372 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ZNF618Q5T7W0 954 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ISLR2Q6UXK2 745 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 PRUNE1Q86TP1 453 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 TTC7BQ86TV6 843 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 KBTBD6Q86V97 674 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ANKRD53Q8N9V6 530 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ZUFSPQ96AP4 578 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 CFAP36Q96G28 342 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 LSM14BQ9BX40 385 aaKnown RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 TSSK1BQ9BXA7 367 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 VPS11Q9H270 941 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 SUCOQ9UBS9 1254 aaKnown RBP11.15□□□□□ -0.62
LINC00342-202ENST00000448494 MYRFQ9Y2G1 1151 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 PCDHGB3Q9Y5G1 929 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 DCCP43146 1447 aa11.15□□□□□ -0.62
LINC00342-202ENST00000448494 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 TAF4O00268 1085 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CCNT1O60563 726 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 DCKP27707 260 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 LTKP29376 864 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SLC26A2P50443 739 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 TXNL4AP83876 142 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 OVGP1Q12889 678 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 STX3Q13277 289 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 UBE3CQ15386 1083 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 RTN1Q16799 776 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ATAD3BQ5T9A4 648 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CNNM4Q6P4Q7 775 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 PGM2L1Q6PCE3 622 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 LYSMD3Q7Z3D4 306 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ADAT2Q7Z6V5 191 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ZNF354CQ86Y25 554 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CHERPQ8IWX8 916 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ASCC1Q8N9N2 400 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SLCO2A1Q92959 643 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 NACC1Q96RE7 527 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 TRIT1Q9H3H1 467 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SEMA6BQ9H3T3 888 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SP140LQ9H930 580 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SYTL2Q9HCH5 934 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 WDR6Q9NNW5 1121 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 TMEM9Q9P0T7 183 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CNOT11Q9UKZ1 510 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 NCANO14594 1321 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SF3B1O75533 1304 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 PABPN1LA6NDY0 278 aaKnown RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ARHGAP42A6NI28 874 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 H0YJX3 145 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 H3BMQ9 156 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 RNF103O00237 685 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 GIPC1O14908 333 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 EGFRP00533 1210 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 KRT3P12035 628 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CPOXP36551 454 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 COILP38432 576 aaPredicted RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 NDST2P52849 883 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 RCAN1P53805 252 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 MAP3K7CLP57077 242 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 KCNA1Q09470 495 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 GALNT2Q10471 571 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 GNA13Q14344 377 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 SLC10A5Q5PT55 438 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 KCTD20Q7Z5Y7 419 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CEP19Q96LK0 163 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 COG8Q96MW5 612 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 METTL22Q9BUU2 404 aaPredicted RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 GCOM2Q9BZD3 368 aaPredicted RBP11.14□□□□□ -0.63
LINC00342-202ENST00000448494 CCSER2Q9H7U1 834 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 PPCSQ9HAB8 311 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 KCNK4Q9NYG8 393 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 ARMCX1Q9P291 453 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 A0A1B0GUL6 1792 aa11.14□□□□□ -0.63
LINC00342-202ENST00000448494 EVPLLA8MZ36 301 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
LINC00342-202ENST00000448494 ZW10O43264 779 aa11.13□□□□□ -0.63
LINC00342-202ENST00000448494 PHLPP1O60346 1717 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms