RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 SAE1Q9UBE0 346 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-218ENST00000439806 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
CPNE1-218ENST00000439806 CAPN7Q9Y6W3 813 aa10.9□□□□□ -0.66
CPNE1-218ENST00000439806 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 C17orf102A2RUQ5 167 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 DCAF8L1A6NGE4 600 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 RASA4BC9J798 803 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 HAS3O00219 553 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 RASA4O43374 803 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ZNF865P0CJ78 1059 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 GNAT1P11488 350 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 CREB1P16220 341 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ATP2A2P16615 1042 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 KRT15P19012 456 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 AKAP5P24588 427 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 STIP1P31948 543 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ACADSBP45954 432 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 TAF6P49848 677 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 RNASELQ05823 741 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 FASTKD3Q14CZ7 662 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 BBS9Q3SYG4 887 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 PKDCCQ504Y2 493 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ANKRD22Q5VYY1 191 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 OLFML2BQ68BL8 750 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ZC3H18Q86VM9 953 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 C7orf31Q8N865 590 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 NAT8LQ8N9F0 302 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 FAM71DQ8N9W8 422 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 GDAP1Q8TB36 358 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 USP6NLQ92738 828 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 LENG1Q96BZ8 264 aaPredicted RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 PIWIL1Q96J94 861 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 RNF157Q96PX1 679 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 TBCBQ99426 244 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 ELAC2Q9BQ52 826 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 SNRNP25Q9BV90 132 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 TRABDQ9H4I3 376 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 PCDH18Q9HCL0 1135 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 UBN1Q9NPG3 1134 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 SENP1Q9P0U3 644 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 SLC24A2Q9UI40 661 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 XPO7Q9UIA9 1087 aaKnown RBP10.89□□□□□ -0.67
CPNE1-218ENST00000439806 NME7Q9Y5B8 376 aa10.89□□□□□ -0.67
CPNE1-218ENST00000439806 MANSC4A6NHS7 340 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 KPNA7A9QM74 516 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 TCP11X1B4DZS4 312 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PIRO00625 290 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PAPSS1O43252 624 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 TREHO43280 583 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 HUS1O60921 280 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 BANF1O75531 89 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 FSBPO95073 299 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 ZBED1O96006 694 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PDGFRBP09619 1106 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 GHRP10912 638 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 LCP1P13796 627 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CCDC130P13994 396 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 TSHRP16473 764 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CYP2B6P20813 491 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 GBP2P32456 591 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SCNN1AP37088 669 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 RGS2P41220 211 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PTPN9P43378 593 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CRYBB1P53674 252 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 BCAR1P56945 870 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 BEX3Q00994 111 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 IL9RQ01113 521 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CCDC142Q17RM4 750 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SOWAHAQ2M3V2 549 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 RAB6CQ53S08 254 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 ALKAL1Q6UXT8 129 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CYP4V2Q6ZWL3 525 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 TMEM110Q86TL2 294 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CDKL3Q8IVW4 592 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PALM2Q8IXS6 379 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PDIK1LQ8N165 341 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 NME8Q8N427 588 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 ANKRD52Q8NB46 1076 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 APPL2Q8NEU8 664 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SLC35F5Q8WV83 523 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CKAP2Q8WWK9 683 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 FAF2Q96CS3 445 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SGSM3Q96HU1 749 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SMC6Q96SB8 1091 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 RAB6CQ9H0N0 254 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 MLXIPLQ9NP71 852 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 EURLQ9NYK6 297 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 FLRT1Q9NZU1 646 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PAK5Q9P286 719 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 PSMC3IPQ9P2W1 217 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-218ENST00000439806 Q9Y3F1 56 aa10.88□□□□□ -0.67
CPNE1-218ENST00000439806 SMIM28A0A1B0GU29 152 aa10.87□□□□□ -0.67
CPNE1-218ENST00000439806 FAM47DPA6NHR8 397 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms