RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 WNT6Q9Y6F9 365 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
HMGB1P49-201ENST00000418882 A0A1W2PPC4 97 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 TARM1B6A8C7 271 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 QSOX1O00391 747 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 SPRY2O43597 315 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 PROP1O75360 226 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 PHKG2P15735 406 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 FGFR2P21802 821 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 STT3AP46977 705 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 ALDH5A1P51649 535 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 PGDP52209 483 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 PMS2P11Q13670 270 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 LONRF1Q17RB8 773 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 FAM153CQ494X1 144 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 MAP9Q49MG5 647 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 USP49Q70CQ1 688 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 RNF44Q7L0R7 432 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 ZNF575Q86XF7 245 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 CCDC33Q8N5R6 958 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 TBC1D5Q92609 795 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 IQCDQ96DY2 449 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 PTGFRNQ9P2B2 879 aa5.38□□□□□ -1.55
HMGB1P49-201ENST00000418882 ANO9A1A5B4 782 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 MANSC4A6NHS7 340 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 CAND2O75155 1236 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 PMPCBO75439 489 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 EPHA3P29320 983 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 GKP32189 559 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 HTR7P34969 479 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 SOX10P56693 466 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 HLTFQ14527 1009 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 TMEM119Q4V9L6 283 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 L1TD1Q5T7N2 865 aaKnown RBP5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 SLC29A4Q7RTT9 530 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 C11orf44Q8N8P7 122 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 CYP2W1Q8TAV3 490 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 RSPRY1Q96DX4 576 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 LRRC46Q96FV0 321 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 GDF15Q99988 308 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 SH3BP4Q9P0V3 963 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 MYO1AQ9UBC5 1043 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 CCNL1Q9UK58 526 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 PHTF1Q9UMS5 762 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 HPSEQ9Y251 543 aa5.37□□□□□ -1.55
HMGB1P49-201ENST00000418882 TISP43B9A030 160 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 FOXN3O00409 490 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 KRT18P05783 430 aaKnown RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 NPSP0C0P6 89 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 ZNF37AP17032 561 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 FBLP22087 321 aaKnown RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 TNFSF4P23510 183 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 PRKAR1BP31321 381 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 MCM5P33992 734 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 GATMP50440 423 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 PROSER3Q2NL68 480 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 COLEC12Q5KU26 742 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 FCRLBQ6BAA4 426 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 HIBCHQ6NVY1 386 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 DPY19L2P1Q6NXN4 242 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 CEP85Q6P2H3 762 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 KIRREL2Q6UWL6 708 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 ZNF782Q6ZMW2 699 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 FANCBQ8NB91 859 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 DPCDQ9BVM2 203 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 ASAP1Q9ULH1 1129 aa5.36□□□□□ -1.55
HMGB1P49-201ENST00000418882 CGB1A6NKQ9 187 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 AQP7P3A6NL99 342 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 CLCA1A8K7I4 914 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 RASA4BC9J798 803 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 MASP2O00187 686 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 EXOC5O00471 708 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 APOL1O14791 398 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 RASA4O43374 803 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 MYL1P05976 194 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 HARSP12081 509 aaKnown RBP5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 DEUP1Q05D60 604 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 IFIT5Q13325 482 aaKnown RBP5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 CRTC1Q6UUV9 634 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 KRT28Q7Z3Y7 464 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 ABHD11Q8NFV4 315 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 RIPOR3Q96MK2 946 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 COLEC11Q9BWP8 271 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 FAM83DQ9H4H8 585 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 ASIC5Q9NY37 505 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 DNAJB11Q9UBS4 358 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 USP22Q9UPT9 525 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 FRMD4BQ9Y2L6 1034 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 SLC27A6Q9Y2P4 619 aa5.35□□□□□ -1.55
HMGB1P49-201ENST00000418882 SMIM22K7EJ46 135 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 THAP12O43422 761 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 PPFIA2O75334 1257 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 JTBO76095 146 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 NDST3O95803 873 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 C1RP00736 705 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 FGAP02671 866 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 PRKCBP05771 671 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 ARP10275 920 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 GABRB3P28472 473 aa5.34□□□□□ -1.55
HMGB1P49-201ENST00000418882 ATICP31939 592 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms