RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ENTPD5O75356 428 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 CALB1P05937 261 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ARF4P18085 180 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TFE3P19532 575 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 OSBPP22059 807 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 SDC4P31431 198 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PHBP35232 272 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PTPN11Q06124 597 aaPredicted RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PLEKHA7Q6IQ23 1121 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 RWDD4Q6NW29 188 aaKnown RBP13.95□□□□□ -0.18
COL6A2-204ENST00000409416 NLRP9Q7RTR0 991 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 UNC5BQ8IZJ1 945 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PYROXD2Q8N2H3 581 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ALLCQ8N6M5 410 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TCP10LQ8TDR4 215 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 SPDL1Q96EA4 605 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 TTC25Q96NG3 672 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PAFAH2Q99487 392 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 C17orf75Q9HAS0 396 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 PCMTD2Q9NV79 361 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 SLC17A7Q9P2U7 560 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 NOD1Q9Y239 953 aa13.95□□□□□ -0.18
COL6A2-204ENST00000409416 ANKRD12Q6UB98 2062 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 HMGCRP04035 888 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 C6orf222P0C671 652 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 LRRC36Q1X8D7 754 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 FNBP1LQ5T0N5 605 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF618Q5T7W0 954 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 CCDC125Q86Z20 511 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 TTC8Q8TAM2 541 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 FAM172AQ8WUF8 416 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ZFP42Q96MM3 310 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 SNX25Q9H3E2 840 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 NXF3Q9H4D5 531 aaKnown RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 DPP3Q9NY33 737 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 NKX1-2Q9UD57 310 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 TUBGCP4Q9UGJ1 667 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 TMEM191CA6NGB0 347 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ASMTLO95671 621 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ELK3P41970 407 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 C1QBPQ07021 282 aaKnown RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 MSS51Q4VC12 460 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ANKRD20A2Q5SQ80 823 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ANKRD20A1Q5TYW2 823 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ANKRD20A3Q5VUR7 823 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 OTOAQ7RTW8 1153 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 LRRC6Q86X45 466 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 EFCAB3Q8N7B9 438 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF75CPQ92670 426 aaPredicted RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 LPPQ93052 612 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 MCUR1Q96AQ8 359 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 MIEF2Q96C03 454 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 NTPCRQ9BSD7 190 aaKnown RBP13.94□□□□□ -0.18
COL6A2-204ENST00000409416 CDHR5Q9HBB8 845 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 USP18Q9UMW8 372 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 MFHAS1Q9Y4C4 1052 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 LTBP1Q14766 1721 aa13.94□□□□□ -0.18
COL6A2-204ENST00000409416 PMM2O15305 246 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 DCTN3O75935 186 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 MMP8P22894 467 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 GEMIN4P57678 1058 aaKnown RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 PDE1BQ01064 536 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 C16orf46Q6P387 395 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 CEP128Q6ZU80 1094 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 DENND5BQ6ZUT9 1274 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 PNPLA1Q8N8W4 532 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 REPS2Q8NFH8 660 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 GRAMD1AQ96CP6 724 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 SH3BP1Q9Y3L3 701 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 COL4A5P29400 1685 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 hCG_1818297A0A087WSY0 165 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 BAG2O95816 211 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 RBL1P28749 1068 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 KDSRQ06136 332 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ZNF252P-AS1Q0IIN9 211 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 GALNTL6Q49A17 601 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 IER5Q5VY09 327 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 PHF13Q86YI8 300 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 BRSK2Q8IWQ3 736 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 RFWD2Q8NHY2 731 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 CCDC124Q96CT7 223 aaKnown RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 L3MBTL3Q96JM7 780 aaPredicted RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 TBC1D10AQ9BXI6 508 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ELOVL4Q9GZR5 314 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 SDCBP2Q9H190 292 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ATXN3LQ9H3M9 355 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 DHX33Q9H6R0 707 aaKnown RBP13.93□□□□□ -0.18
COL6A2-204ENST00000409416 ARHGEF3Q9NR81 526 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
COL6A2-204ENST00000409416 CYTH4Q9UIA0 394 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms