RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 SCARF1Q14162 830 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 DGUOKQ16854 277 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 FAM98BQ52LJ0 330 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 ATF7IP2Q5U623 682 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SNX31Q8N9S9 440 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 TDRD5Q8NAT2 981 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 SLC7A14Q8TBB6 771 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 GINS4Q9BRT9 223 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 TPRKBQ9Y3C4 175 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 PRR23AA6NEV1 266 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 C2orf81A6NN90 581 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 F5H423 210 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 BNIP3LO60238 219 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 TSHRP16473 764 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 HOXB8P17481 243 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 GRTP1Q5TC63 336 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 GANCQ8TET4 914 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 THUMPD3Q9BV44 507 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 STN1Q9H668 368 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 TCF3P15923 654 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SERPINB5P36952 375 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 ZNF844Q08AG5 666 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 FAM45BPQ6NSW5 357 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 FUKQ8N0W3 1084 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SEPT1Q8WYJ6 367 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 PPP1R16BQ96T49 567 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 TCF7L2Q9NQB0 619 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SMIM31A0A1B0GVY4 71 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 NUP62P37198 522 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 NCALDP61601 193 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 XIAPP98170 497 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 PPIDQ08752 370 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 NAIF1Q69YI7 327 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 USP49Q70CQ1 688 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 WDR60Q8WVS4 1066 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 LRRC39Q96DD0 335 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 OXNAD1Q96HP4 312 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 METTL5Q9NRN9 209 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 USE1Q9NZ43 259 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 CYP11B2P19099 503 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 YY1P25490 414 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 TOP3AQ13472 1001 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 COG2Q14746 738 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 ACAP1Q15027 740 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 CNGA2Q16280 664 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 TIMM50Q3ZCQ8 353 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 STRIP1Q5VSL9 837 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 CCDC81Q6ZN84 652 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 OTULINQ96BN8 352 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 GPRASP2Q96D09 838 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 RAD21L1Q9H4I0 556 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 RNPEPL1Q9HAU8 725 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 C8orf4Q9NR00 106 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 CYP39A1Q9NYL5 469 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SNX9Q9Y5X1 595 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 FAM205CA6NFA0 338 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 CD3EAPO15446 510 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 RGS5O15539 181 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 RHOBTB1O94844 696 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 FAM200BP0CF97 657 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 MLNP12872 115 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 SAMD4BQ5PRF9 694 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 PLA2G4FQ68DD2 849 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 NET1Q7Z628 596 aaPredicted RBP9.89□□□□□ -0.83
SNX1-202ENST00000380285 MPP4Q96JB8 637 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 KRT84Q9NSB2 600 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 NAALADL1Q9UQQ1 740 aa9.89□□□□□ -0.83
SNX1-202ENST00000380285 VPS26AO75436 327 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 PLEKP08567 350 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 CPA3P15088 417 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ZNF135P52742 658 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 RNF43Q68DV7 783 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 CELF1Q92879 486 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 WRNIP1Q96S55 665 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 CYP3A43Q9HB55 503 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 ZC3H4Q9UPT8 1303 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 MOCS2O96007 188 aaPredicted RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 ALDH1A1P00352 501 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 VDRP11473 427 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 SARSP49591 514 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 LRRC74AQ0VAA2 488 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 IKBIPQ70UQ0 350 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 HPDLQ96IR7 371 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 TBCBQ99426 244 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 UGT2B28Q9BY64 529 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 AGXT2Q9BYV1 514 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DNAJC16Q9Y2G8 782 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 DGKIO75912 1065 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 FBXO21O94952 628 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 RPLP2P05387 115 aaKnown RBP9.88□□□□□ -0.83
SNX1-202ENST00000380285 GLI1P08151 1106 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 PRIM2P49643 509 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 MGAT5Q09328 741 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 MEA1Q16626 185 aa9.88□□□□□ -0.83
SNX1-202ENST00000380285 GDPD5Q8WTR4 605 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms