RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 C4orf22Q6V702 233 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 FAM71AQ8IYT1 594 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 PSPC1Q8WXF1 523 aaKnown RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 CDRT15Q96T59 188 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 TMEM165Q9HC07 324 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 EML4Q9HC35 981 aaKnown RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SLC17A7Q9P2U7 560 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 MYRFQ9Y2G1 1151 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 H0Y626 953 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 TRIM16O95361 564 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 KRT8P05787 483 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 UQCRBP14927 111 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 CYP24A1Q07973 514 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SPRED3Q2MJR0 410 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SEL1L3Q68CR1 1132 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 AAGABQ6PD74 315 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 DENND5BQ6ZUT9 1274 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 USP6NLQ92738 828 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 IL1RL2Q9HB29 575 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 PFDN6O15212 129 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 LIASO43766 372 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 OCM2P0CE71 109 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 OCMP0CE72 109 aaPredicted RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 NPTX2P47972 431 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 RFWD3Q6PCD5 774 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 CROCCP3Q8IVE0 287 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ZSWIM2Q8NEG5 633 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 PIWIL2Q8TC59 973 aaKnown RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 TARS2Q9BW92 718 aaKnown RBP16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ANKEF1Q9NU02 776 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 SLC39A10Q9ULF5 831 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 TGFB1I1O43294 461 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 GPD1P21695 349 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 NR1H2P55055 460 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 GCNT1Q02742 428 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ARL13BQ3SXY8 428 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ARSHQ5FYA8 562 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 TMCO5AQ8N6Q1 288 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 STKLD1Q8NE28 680 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 VCPIP1Q96JH7 1222 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ACSS3Q9H6R3 686 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 LRRC4CQ9HCJ2 640 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 KCNMB3Q9NPA1 279 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 LGALS13Q9UHV8 139 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 RPS6KL1Q9Y6S9 549 aa16.54■□□□□ 0.24
CLSTN1-201ENST00000361311 ALOX15BO15296 676 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ACSBG2Q5FVE4 666 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ITPRIPL1Q6GPH6 555 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ARHGEF1Q92888 912 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 RRN3Q9NYV6 651 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 FRMPD4Q14CM0 1322 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 CNTFP26441 200 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 FOLH1Q04609 750 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 SFSWAPQ12872 951 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ATP13A4Q4VNC1 1196 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 EMC1Q8N766 993 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 RBM15BQ8NDT2 890 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 STXBP5LQ9Y2K9 1186 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 WASF2Q9Y6W5 498 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 GLRA2P23416 452 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ATICP31939 592 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 INPP1P49441 399 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 EIF2B2P49770 351 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 C21orf59P57076 290 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 BOLA3Q53S33 107 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 LPCAT4Q643R3 524 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 RNF146Q9NTX7 359 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 R3HDM2Q9Y2K5 976 aaKnown RBP16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 ANGPTL3Q9Y5C1 460 aa16.53■□□□□ 0.24
CLSTN1-201ENST00000361311 F8W8V4 182 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 CALCAP01258 141 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 ALBP02768 609 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 C6orf222P0C671 652 aaPredicted RBP16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 ME2P23368 584 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 USP46P62068 366 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 ACAP1Q15027 740 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 C1orf186Q6ZWK4 172 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 TRIM74Q86UV6 250 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 TRIM73Q86UV7 250 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 DACT3Q96B18 629 aaPredicted RBP16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 CLPTM1LQ96KA5 538 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 SYT15Q9BQS2 421 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 LRRC42Q9Y546 428 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 PEX1O43933 1283 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 ARHGDIAP52565 204 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 ITPK1Q13572 414 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 RTKN2Q8IZC4 609 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 CYP4X1Q8N118 509 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 NAT14Q8WUY8 206 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 SHC3Q92529 594 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 FSD1LQ9BXM9 530 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 PACSIN3Q9UKS6 424 aa16.52■□□□□ 0.24
CLSTN1-201ENST00000361311 AK5Q9Y6K8 562 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms