RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 LRRN2O75325 713 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 USP1O94782 785 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 ALOX12P18054 663 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCNA2P20248 432 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRDX5P30044 214 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 MVDP53602 400 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 PPP2R5DQ14738 602 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 C19orf54Q5BKX5 351 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 SUSD4Q5VX71 490 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 FAM90A2PQ658T7 463 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 RABEPKQ7Z6M1 372 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 PTPMT1Q8WUK0 201 aaPredicted RBP2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 LIN37Q96GY3 246 aaPredicted RBP2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 EYA3Q99504 573 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 MPHOSPH9Q99550 1183 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 A1CFQ9NQ94 594 aaKnown RBP2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 GLRX2Q9NS18 164 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 FAM105AQ9NUU6 356 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARGLU1Q9NWB6 273 aaPredicted RBP2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 SEL1LQ9UBV2 794 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 LIPGQ9Y5X9 500 aa2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 SPAG9O60271 1321 aaKnown RBP2.09□□□□□ -2.08
SMARCAD1-202ENST00000359052 COL4A2P08572 1712 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 LRRC14BA6NHZ5 514 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 AQP12BA6NM10 295 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 VEGFDO43915 354 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 KAT7O95251 611 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ITGB2P05107 769 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 GRK5P34947 590 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 BSGP35613 385 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CDC42EP1Q00587 391 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 LRRC74AQ0VAA2 488 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MTAPQ13126 283 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 PGM5Q15124 567 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 JADE1Q6IE81 842 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC4A10Q6U841 1118 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 LRRN4CLQ8ND94 238 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CNNM3Q8NE01 707 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 NT5C3BQ969T7 300 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FER1L6-AS2Q96M78 137 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 VPS16Q9H269 839 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ZNF395Q9H8N7 513 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ORC3Q9UBD5 711 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 AFF4Q9UHB7 1163 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 RABGAP1Q9Y3P9 1069 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MTCL1Q9Y4B5 1905 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRICKLE3O43900 615 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 GLP2RO95838 553 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 KCNA2P16389 499 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ST5P78524 1137 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 TAP1Q03518 808 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 HYAL2Q12891 473 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CLEC16AQ2KHT3 1053 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CCDC92Q53HC0 331 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 BEND5Q7L4P6 421 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC9B2Q86UD5 537 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 HID1Q8IV36 788 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SAMD14Q8IZD0 417 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ARMC10Q8N2F6 343 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 EAF2Q96CJ1 260 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 RBM15Q96T37 977 aaKnown RBP eCLIP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 HEPHQ9BQS7 1158 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 GAR1Q9NY12 217 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 XDHP47989 1333 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ATXN2Q99700 1313 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 IRS2Q9Y4H2 1338 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 H0Y8X5 98 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 F2RL2O00254 374 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CACNG3O60359 315 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SASH1O94885 1247 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 KIF20AO95235 890 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ELF1P32519 619 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FOXL2P58012 376 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SEC23BQ15437 767 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FAM198BQ6UWH4 519 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MCM10Q7L590 875 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MTDHQ86UE4 582 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MIB1Q86YT6 1006 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 CILP2Q8IUL8 1156 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SCN4BQ8IWT1 228 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SHISA5Q8N114 240 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FAM71DQ8N9W8 422 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FERD3LQ96RJ6 166 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SLC22A12Q96S37 553 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 MLPHQ9BV36 600 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 TEX13AQ9BXU3 409 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 USP15Q9Y4E8 981 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 NEDD4P46934 1319 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ATRNO75882 1429 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 HMGB1P1B2RPK0 211 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 PAGE4O60829 102 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 LILRB5O75023 590 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 GADD45BO75293 160 aaPredicted RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 IL18BPO95998 194 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 FUCA1P04066 466 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 SNRNP70P08621 437 aaKnown RBP2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 PRR35P0CG20 571 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 BMP1P13497 986 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 NOS3P29474 1203 aa2.08□□□□□ -2.08
SMARCAD1-202ENST00000359052 ATP1A4Q13733 1029 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms