RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PCDHGA11Q9Y5H2 935 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 SNCAIPQ9Y6H5 919 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 BHMG1C9JSJ3 638 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-201ENST00000322535 K7EPI3 171 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 ATMINO43313 823 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-201ENST00000322535 PCNAP12004 261 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 ATP1A4Q13733 1029 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 C10orf76Q5T2E6 689 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 RGS9BPQ6ZS82 235 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 ACAD11Q709F0 780 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 METTL25Q8N6Q8 603 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 RAB3IL1Q8TBN0 382 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 MTMR9Q96QG7 549 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 UQCC2Q9BRT2 126 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 PALMDQ9NP74 551 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 MAN1C1Q9NR34 630 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 TAS2R1Q9NYW7 299 aa10.72□□□□□ -0.69
SF3B2-201ENST00000322535 LAMA2P24043 3122 aaKnown RBP10.72□□□□□ -0.69
SF3B2-201ENST00000322535 COL2A1P02458 1487 aaPredicted RBP10.72□□□□□ -0.69
SF3B2-201ENST00000322535 POTEB3A0JP26 581 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 GOLGA8CPA6NN73 597 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 H3BRJ5 948 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 H3BSA7 217 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 HAT1O14929 419 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 TRMUO75648 421 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 TSPAN9O75954 239 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 POLR2MP0CAP2 368 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CETPP11597 493 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 LONP1P36776 959 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 SEPT6Q14141 434 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 POTEBQ6S5H4 581 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 C4orf22Q6V702 233 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 DCDC5Q6ZRR9 648 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RIPOR1Q6ZS17 1223 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CYP4V2Q6ZWL3 525 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ZBTB46Q86UZ6 589 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RHOT2Q8IXI1 618 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 LSMEM2Q8N112 164 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 GLIS3Q8NEA6 775 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PEX13Q92968 403 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PMEPA1Q969W9 287 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CTRCQ99895 268 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 KLHL3Q9UH77 587 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 STARD13Q9Y3M8 1113 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 MAD1L1Q9Y6D9 718 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ATAD5Q96QE3 1844 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 E9PMD0 336 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 VWA5AO00534 786 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 THAP12O43422 761 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CLASP2O75122 1294 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 NOL4O94818 638 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 FARP2O94887 1054 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ARP10275 920 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RARGP13631 454 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 VCLP18206 1134 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CDH3P22223 829 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PIK3CAP42336 1068 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RPS6P62753 249 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 AP2B1P63010 937 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PLCB3Q01970 1234 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CALCOCO2Q13137 446 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 MOGSQ13724 837 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CTTNQ14247 550 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 GRAMD1BQ3KR37 738 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ARL6IP4Q66PJ3 421 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CCDC62Q6P9F0 684 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PPP1R21Q6ZMI0 780 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 SFR1Q86XK3 245 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 Q8N9G6 341 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RFWD2Q8NHY2 731 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PYROXD1Q8WU10 500 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 ANKRD49Q8WVL7 239 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 C10orf82Q8WW14 230 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 GCNAQ96QF7 691 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 TAAR1Q96RJ0 339 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 PYM1Q9BRP8 204 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 MRPL9Q9BYD2 267 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RNF38Q9H0F5 515 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 RBM38Q9H0Z9 239 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 SEPT11Q9NVA2 429 aaKnown RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 THAP1Q9NVV9 213 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CRNNQ9UBG3 495 aaPredicted RBP10.71□□□□□ -0.69
SF3B2-201ENST00000322535 NAALADL1Q9UQQ1 740 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 CSADQ9Y600 493 aa10.71□□□□□ -0.69
SF3B2-201ENST00000322535 C15orf38-AP3S2A0A0A6YYH1 394 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 GSTTP1A0A1W2PQM5 241 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 B2RBV5 119 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 CES2O00748 559 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 PFDN6O15212 129 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 STRNO43815 780 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 CIB2O75838 187 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 TFAP2AP05549 437 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 PRKACAP17612 351 aa10.71□□□□□ -0.7
SF3B2-201ENST00000322535 ZNF135P52742 658 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms