RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 TMEM199Q8N511 208 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 MRPL9Q9BYD2 267 aaKnown RBP11.26□□□□□ -0.61
CASP3-201ENST00000308394 CDH9Q9ULB4 789 aa11.26□□□□□ -0.61
CASP3-201ENST00000308394 MYBPHLA2RUH7 354 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 NT5C1B-RDH14C9J2C7 533 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 E5RJQ4 531 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 KIAA0355O15063 1070 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 TRAPPC3O43617 180 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 AP1G2O75843 785 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 PYGLP06737 847 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 ACRP10323 421 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 KRT3P12035 628 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 BCAT1P54687 386 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 BCAR1P56945 870 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 SLC8A3P57103 927 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 RNASE9P60153 205 aaKnown RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 YWHAHQ04917 246 aaPredicted RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 DBN1Q16643 649 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 PKDCCQ504Y2 493 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 OR6B2Q6IFH4 312 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 MFSD5Q6N075 450 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 CPNE8Q86YQ8 564 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 C10orf67Q8IYJ2 551 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 THEM5Q8N1Q8 247 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 FRS2Q8WU20 508 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 SLC35F5Q8WV83 523 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 HES6Q96HZ4 224 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 MS4A14Q96JA4 679 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 CAPS2Q9BXY5 557 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 CRTAC1Q9NQ79 661 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 EIF3FO00303 357 aaPredicted RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 CYP11A1P05108 521 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 TKTP29401 623 aaKnown RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 PBX3P40426 434 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 ZNF268Q14587 947 aaPredicted RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 RBBP5Q15291 538 aaKnown RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 CREG2Q8IUH2 290 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 FUKQ8N0W3 1084 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 GIPC2Q8TF65 315 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 HNRNPABQ99729 332 aaKnown RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 COLEC11Q9BWP8 271 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.25□□□□□ -0.61
CASP3-201ENST00000308394 MIS12Q9H081 205 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 PRKAG2Q9UGJ0 569 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 USTQ9Y2C2 406 aa11.25□□□□□ -0.61
CASP3-201ENST00000308394 ABHD14A-ACY1A0A1B0GW23 586 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CTAGE15A4D2H0 777 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CTAGE8P0CG41 777 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TSPAN7P41732 249 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 PAFAH1B1P43034 410 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 GABRB2P47870 512 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CKAP4Q07065 602 aaKnown RBP11.24□□□□□ -0.61
CASP3-201ENST00000308394 SLMAPQ14BN4 828 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 KRT72Q14CN4 511 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 FAM102AQ5T9C2 384 aaPredicted RBP11.24□□□□□ -0.61
CASP3-201ENST00000308394 DAB2IPQ5VWQ8 1189 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 NEK10Q6ZWH5 1172 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
CASP3-201ENST00000308394 CTAGE6Q86UF2 777 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 SCUBE3Q8IX30 993 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CTAGE4Q8IX94 777 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.24□□□□□ -0.61
CASP3-201ENST00000308394 PCED1BQ96HM7 432 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 ACBD6Q9BR61 282 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
CASP3-201ENST00000308394 SMARCAL1Q9NZC9 954 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 ADAM28Q9UKQ2 775 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 PCDHB8Q9UN66 801 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TTC3P53804 2025 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TCRBV5S1A1TA0A578 114 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 SIGLEC16A6NMB1 481 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TMEM189-UBE2V1I3L0A0 370 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CEP104O60308 925 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 LCP1P13796 627 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 SLC11A1P49279 550 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 SNX16P57768 344 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TAP1Q03518 808 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 OTOP2Q7RTS6 562 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 LRRC43Q8N309 656 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 DCLK2Q8N568 766 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 MYCBPAPQ8TBZ2 947 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 TSC1Q92574 1164 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 RTP3Q9BQQ7 232 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 B3GNT5Q9BYG0 378 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 ATP8A1Q9Y2Q0 1164 aa11.24□□□□□ -0.61
CASP3-201ENST00000308394 MIF4GDA9UHW6 222 aaKnown RBP11.23□□□□□ -0.61
CASP3-201ENST00000308394 PDE2AO00408 941 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms