RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 SERPINB12Q96P63 405 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 ZNF862O60290 1169 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 COX10Q12887 443 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 NECAB2Q7Z6G3 386 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 CARNMT1Q8N4J0 409 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 C19orf18Q8NEA5 215 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 RUBCNQ92622 972 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 IPPQ9Y573 584 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 ATP7BP35670 1465 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 DGAT1O75907 488 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 APOA4P06727 396 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 CLK2P49760 499 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 CSTF3Q12996 717 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 DNAJC14Q6Y2X3 702 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 KRT78Q8N1N4 520 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 DDX50Q9BQ39 737 aaKnown RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 CYP19A1P11511 503 aaPredicted RBP17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 MAPK7Q13164 816 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 PTK6Q13882 451 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 ZSWIM1Q9BR11 485 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 FICDQ9BVA6 458 aa17.35■□□□□ 0.37
TSPAN3-201ENST00000267970 ZNF189O75820 626 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ALOX12P18054 663 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 CHRNB3Q05901 458 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 XKR3Q5GH77 459 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ZBTB49Q6ZSB9 765 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 COL23A1Q86Y22 540 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 PDP2Q9P2J9 529 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 PACSIN3Q9UKS6 424 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 DAGLAQ9Y4D2 1042 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 GNG14A0A1W2PPG7 69 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 TNPO2O14787 897 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ATP6AP1LQ52LC2 224 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 CLEC4GQ6UXB4 293 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 TAAR1Q96RJ0 339 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 SOAT2O75908 522 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ARF5P84085 180 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 CNGA2Q16280 664 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 USP39Q53GS9 565 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 TBCELQ5QJ74 424 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 TRIM65Q6PJ69 517 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 SLC30A10Q6XR72 485 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 EFCAB3Q8N7B9 438 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 MED8Q96G25 268 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 SPATA31E1Q6ZUB1 1445 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 EXTL3O43909 919 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ACO1P21399 889 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 CENPCQ03188 943 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ZNF57Q68EA5 555 aaPredicted RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 CBWD2Q8IUF1 395 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 STX7O15400 261 aaKnown RBP17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 GLI1P08151 1106 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 ITGAXP20702 1163 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 GDPD5Q8WTR4 605 aa17.34■□□□□ 0.37
TSPAN3-201ENST00000267970 PCP4L1A6NKN8 68 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 HARS2P49590 506 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 ARMCX4Q5H9R4 360 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 CACHD1Q5VU97 1274 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 CELF6Q96J87 481 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 WDR35Q9P2L0 1181 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 STAU1O95793 577 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 VTNP04004 478 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 ALX1Q15699 326 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 SEL1L3Q68CR1 1132 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 TNIP2Q8NFZ5 429 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 RAET1EQ8TD07 263 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 EHD4Q9H223 541 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 SMARCAD1Q9H4L7 1026 aa17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 DDX20Q9UHI6 824 aaKnown RBP17.33■□□□□ 0.37
TSPAN3-201ENST00000267970 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 CDH18Q13634 790 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 TRAPPC11Q7Z392 1133 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 PABPC3Q9H361 631 aaKnown RBP17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 DPP3Q9NY33 737 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 NARFQ9UHQ1 456 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 AGAP9Q5VTM2 703 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 C3orf67Q6ZVT6 689 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 RNF19AQ9NV58 838 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 RRN3P2A6NIE6 340 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 SPATA16Q9BXB7 569 aa17.33■□□□□ 0.36
TSPAN3-201ENST00000267970 HNRNPRO43390 633 aaKnown RBP17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM153BP0C7A2 387 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM153CQ494X1 144 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 CDC42EP5Q6NZY7 148 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 NYAP1Q6ZVC0 841 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 CACUL1Q86Y37 369 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 MICALL2Q8IY33 904 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 ATP8B4Q8TF62 1192 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 JMJD4Q9H9V9 463 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 SCUBE2Q9NQ36 999 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 MAP10Q9P2G4 905 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 TRPC4Q9UBN4 977 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 IQCMA0A1B0GVH7 501 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 THRAP10827 490 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 KPNB1Q14974 876 aaKnown RBP17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 FAM131BQ86XD5 332 aa17.32■□□□□ 0.36
TSPAN3-201ENST00000267970 VPS37AQ8NEZ2 397 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms