RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GORABQ5T7V8 394 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 DEPDC1Q5TB30 811 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 TLDC1Q6P9B6 456 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 CACNA2D3Q8IZS8 1091 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 FAM71BQ8TC56 605 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ATRIPQ8WXE1 791 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 LARP4BQ92615 738 aaKnown RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 GLG1Q92896 1179 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 MUL1Q969V5 352 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 INO80BQ9C086 356 aaPredicted RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ZCWPW1Q9H0M4 648 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ALG13Q9NP73 1137 aaKnown RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 EHD3Q9NZN3 535 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 RIMKLBQ9ULI2 386 aa5.26□□□□□ -1.57
CCDC54-201ENST00000261058 ARID4BQ4LE39 1312 aaPredicted RBP5.26□□□□□ -1.57
CCDC54-201ENST00000261058 LGALS16A8MUM7 142 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 PEX1O43933 1283 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 COQ9O75208 318 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 TJP3O95049 919 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 ESRRBO95718 433 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 GLP2RO95838 553 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 ONECUT2O95948 504 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 INSRRP14616 1297 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 VEGFAP15692 232 aaPredicted RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 PECAM1P16284 738 aaPredicted RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 KRT4P19013 534 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 SERPINF1P36955 418 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 LIPAP38571 399 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 GATMP50440 423 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 FOXI1Q12951 378 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 ATP1A4Q13733 1029 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 BLMHQ13867 455 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 TBCCQ15814 346 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 PFKFB4Q16877 469 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 LY6KQ17RY6 165 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 ZXDCQ2QGD7 858 aaPredicted RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 PRR16Q569H4 304 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 SLC9A4Q6AI14 798 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 USP51Q70EK9 711 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 LCORLQ8N3X6 602 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 AMER2Q8N7J2 671 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 TOR1AIP2Q8NFQ8 470 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 IPO4Q8TEX9 1081 aaKnown RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 EID2BQ96D98 161 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 RMDN3Q96TC7 470 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 GLOD4Q9HC38 313 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 AGO4Q9HCK5 861 aaKnown RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 OBP2BQ9NPH6 170 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 DKK3Q9UBP4 350 aa5.25□□□□□ -1.57
CCDC54-201ENST00000261058 MAGED2Q9UNF1 606 aaPredicted RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 DRG1Q9Y295 367 aaKnown RBP5.25□□□□□ -1.57
CCDC54-201ENST00000261058 NXPH3O95157 252 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 NTSR2O95665 410 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 TACR2P21452 398 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 RBL1P28749 1068 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 MCM7P33993 719 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 AVPR1BP47901 424 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 MPP3Q13368 585 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 TRIM14Q14142 442 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 TRIM71Q2Q1W2 868 aaKnown RBP5.24□□□□□ -1.57
CCDC54-201ENST00000261058 ARHGAP15Q53QZ3 475 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 INO80DQ53TQ3 878 aaPredicted RBP5.24□□□□□ -1.57
CCDC54-201ENST00000261058 ZNF627Q7L945 461 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 VRK3Q8IV63 474 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 SUN3Q8TAQ9 357 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 UBE2Q2Q8WVN8 375 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 CTHRC1Q96CG8 243 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 FBXL20Q96IG2 436 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 ZBTB45Q96K62 511 aaPredicted RBP5.24□□□□□ -1.57
CCDC54-201ENST00000261058 HERPUD2Q9BSE4 406 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 ZNF341Q9BYN7 854 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 TMOD4Q9NZQ9 345 aa5.24□□□□□ -1.57
CCDC54-201ENST00000261058 AQP12BA6NM10 295 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 M0R3H8 397 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 ACKR2O00590 384 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 PCDH17O14917 1159 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 PIP5K1CO60331 668 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 ADH4P08319 380 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 NPPBP16860 134 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 GRK6P43250 576 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 GPS1Q13098 491 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 EIF2B5Q13144 721 aaKnown RBP5.23□□□□□ -1.57
CCDC54-201ENST00000261058 BMPR2Q13873 1038 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 ACOX1Q15067 660 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 CYP1B1Q16678 543 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 TREML2Q5T2D2 321 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 TANGO2Q6ICL3 276 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 CAND1Q86VP6 1230 aaKnown RBP5.23□□□□□ -1.57
CCDC54-201ENST00000261058 SLC44A3Q8N4M1 653 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 BEND2Q8NDZ0 799 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 PDLIM2Q96JY6 352 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 HIST1H2AAQ96QV6 131 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 PRRX2Q99811 253 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 NUDT22Q9BRQ3 303 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 TOR3AQ9H497 397 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 HELLSQ9NRZ9 838 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 SERTAD4Q9NUC0 356 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 FOXJ2Q9P0K8 574 aa5.23□□□□□ -1.57
CCDC54-201ENST00000261058 SALL3Q9BXA9 1300 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms