RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 A0A0G2JND7 137 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 SOCS7O14512 581 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 CHADO15335 359 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 HNRNPCL1O60812 293 aaKnown RBP15.89■□□□□ 0.13
DDX56-201ENST00000258772 USP2O75604 605 aaPredicted RBP15.89■□□□□ 0.13
DDX56-201ENST00000258772 HMGCRP04035 888 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 INHBAP08476 426 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 STAG3L1P0CL83 205 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 VDRP11473 427 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 GNAZP19086 355 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 GPD1P21695 349 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 CLCN3P51790 818 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 YWHAGP61981 247 aaKnown RBP eCLIP15.89■□□□□ 0.13
DDX56-201ENST00000258772 TFDP2Q14188 446 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 STK32AQ8WU08 396 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 RXFP2Q8WXD0 754 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 APOPT1Q96IL0 206 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 R3HDMLQ9H3Y0 253 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 CYP3A43Q9HB55 503 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 USP29Q9HBJ7 922 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 BATF3Q9NR55 127 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 C2CD4BA6NLJ0 364 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 H7C0C1 242 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 AVILO75366 819 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 SPAG6O75602 509 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 PDGFRAP16234 1089 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 ATICP31939 592 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 ATP5OP48047 213 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 C15orf59Q2T9L4 293 aaPredicted RBP15.89■□□□□ 0.13
DDX56-201ENST00000258772 FAM47CQ5HY64 1035 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 WASHC2DQ5SRD0 308 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 FAM182AQ5T1J6 154 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 TRNP1Q6NT89 227 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 BZW1Q7L1Q6 419 aaKnown RBP15.89■□□□□ 0.13
DDX56-201ENST00000258772 KCNV2Q8TDN2 545 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 FAF2Q96CS3 445 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 FAM111AQ96PZ2 611 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 HEY2Q9UBP5 337 aa15.89■□□□□ 0.13
DDX56-201ENST00000258772 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 PYGBP11216 843 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 ARFIP2P53365 341 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 CBLBQ13191 982 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 C1orf228Q6PIY5 440 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 DPH6Q7L8W6 267 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 RNF157Q96PX1 679 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 NUDCD1Q96RS6 583 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 ASCC2Q9H1I8 757 aaPredicted RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 VRTNQ9H8Y1 702 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 KCNK13Q9HB14 408 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 A0A0G2JMZ2 1700 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 LRRC37A2A6NM11 1700 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 TGDSO95455 350 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 TPBGLP0DKB5 382 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 PRKD1Q15139 912 aaPredicted RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 MAP1SQ66K74 1059 aaPredicted RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 OR6B2Q6IFH4 312 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 TTC17Q96AE7 1141 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 SPATA33Q96N06 139 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 DENND2DQ9H6A0 471 aaPredicted RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 PNPLA8Q9NP80 782 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 RAB6BQ9NRW1 208 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 PAK5Q9P286 719 aa15.88■□□□□ 0.13
DDX56-201ENST00000258772 RPL26L1Q9UNX3 145 aaKnown RBP15.88■□□□□ 0.13
DDX56-201ENST00000258772 E7ENQ6 273 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 PIK3R2O00459 728 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 PRPSAP2O60256 369 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 CSDE1O75534 798 aaKnown RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 C1QAP02745 245 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 PGK2P07205 417 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 VGLL4Q14135 290 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 CDO1Q16878 200 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 PRPF39Q86UA1 669 aaKnown RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 PLD5Q8N7P1 536 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 ENDOVQ8N8Q3 282 aaKnown RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 PIWIL1Q96J94 861 aaKnown RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 ANKRD27Q96NW4 1050 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 MIPEPQ99797 713 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 TUBB6Q9BUF5 446 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 IFT122Q9HBG6 1241 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 PRMT7Q9NVM4 692 aaPredicted RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 DONSONQ9NYP3 566 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 CNTN3Q9P232 1028 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 SUFUQ9UMX1 484 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 MTO1Q9Y2Z2 717 aaKnown RBP15.87■□□□□ 0.13
DDX56-201ENST00000258772 PPP2R3BQ9Y5P8 575 aa15.87■□□□□ 0.13
DDX56-201ENST00000258772 CFAP69A5D8W1 941 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 HBP1O60381 514 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 CCDC22O60826 627 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 HAUS5O94927 633 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 DLDP09622 509 aaKnown RBP15.86■□□□□ 0.13
DDX56-201ENST00000258772 NEFHP12036 1026 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 P4HA1P13674 534 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 CYP3A5P20815 502 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 BGNP21810 368 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 IL4RP24394 825 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 FAM183BPQ6ZVS7 135 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 SLC26A11Q86WA9 606 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 MAP7D3Q8IWC1 876 aa15.86■□□□□ 0.13
DDX56-201ENST00000258772 HPDLQ96IR7 371 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms