RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 IRX4P78413 519 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 TFAMQ00059 246 aaKnown RBP10.71□□□□□ -0.69
PHGDH-222ENST00000641587 AMPD2Q01433 879 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 MESP2Q0VG99 397 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 STIM1Q13586 685 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 MORC3Q14149 939 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 GAB4Q2WGN9 574 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 UAP1L1Q3KQV9 507 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 DPCR1Q3MIW9 517 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 GON4LQ3T8J9 2241 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 C2orf27AQ580R0 203 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 INTS6LQ5JSJ4 861 aaKnown RBP10.71□□□□□ -0.69
PHGDH-222ENST00000641587 ZNF658Q5TYW1 1059 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-222ENST00000641587 KLHL10Q6JEL2 608 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 TTC30AQ86WT1 665 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 SCN4BQ8IWT1 228 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 CCDC33Q8N5R6 958 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 FRMD1Q8N878 549 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 C1orf127Q8N9H9 656 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 DEFB124Q8NES8 71 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 USP33Q8TEY7 942 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 RLN3Q8WXF3 142 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 ATP2A3Q93084 1043 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 ZNF560Q96MR9 790 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 FAM213AQ9BRX8 229 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 GTPBP4Q9BZE4 634 aaKnown RBP10.71□□□□□ -0.69
PHGDH-222ENST00000641587 MRPL44Q9H9J2 332 aaKnown RBP10.71□□□□□ -0.69
PHGDH-222ENST00000641587 SLC39A2Q9NP94 309 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 ZDHHC4Q9NPG8 344 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 GCNT4Q9P109 453 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 AGAP1Q9UPQ3 857 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 STYXL1Q9Y6J8 313 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 FREM2Q5SZK8 3169 aa10.71□□□□□ -0.7
PHGDH-222ENST00000641587 ZFYVE26Q68DK2 2539 aa10.71□□□□□ -0.7
PHGDH-222ENST00000641587 CACNA1EQ15878 2313 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 ADAMTS9Q9P2N4 1935 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 DMXL2Q8TDJ6 3036 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 ATXN2Q99700 1313 aaKnown RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 K7EQS6 105 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 ATP2C2O75185 946 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 USP17L7P0C7H9 530 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 DHPSP49366 369 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 PSMC1P62191 440 aaKnown RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 NFE2Q16621 373 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 DAB2IPQ5VWQ8 1189 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 LMBRD2Q68DH5 695 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 C11orf57Q6ZUT1 292 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 ARMCX6Q7L4S7 300 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 CYP2U1Q7Z449 544 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 RASSF3Q86WH2 238 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 MLKLQ8NB16 471 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 CXorf38Q8TB03 319 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 PIGKQ92643 395 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 TRMT2BQ96GJ1 504 aaKnown RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 MYRFLQ96LU7 910 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 FUCA2Q9BTY2 467 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 SCNM1Q9BWG6 230 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 NAT10Q9H0A0 1025 aaKnown RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM206Q9H813 350 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 TMEM9BQ9NQ34 198 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 FSCN3Q9NQT6 498 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 UXTQ9UBK9 157 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-222ENST00000641587 SEL1LQ9UBV2 794 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 MAPK8IP1Q9UQF2 711 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 PI4KAP42356 2102 aa10.7□□□□□ -0.7
PHGDH-222ENST00000641587 LOC400499M0QZD8 3231 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 FRMD3A2A2Y4 597 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 GOLGA8IPA6NC78 632 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 GOLGA8JA6NMD2 632 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 KHNYNO15037 678 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 PPP1R37O75864 691 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 GCNT3O95395 438 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 KRT19P08727 400 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 BMP6P22004 513 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 USP46P62068 366 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 RPL10AP62906 217 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 USP39Q53GS9 565 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 SLFN12LQ6IEE8 588 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 STXBP4Q6ZWJ1 553 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 C12orf40Q86WS4 652 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 BRSK2Q8IWQ3 736 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ADGRF2Q8IZF7 708 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 CSGALNACT2Q8N6G5 542 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 KDF1Q8NAX2 398 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 NOC3LQ8WTT2 800 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 GATA6Q92908 595 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 CNOT6LQ96LI5 555 aaKnown RBP10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ACBD6Q9BR61 282 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 FGFBP2Q9BYJ0 223 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 MTMR12Q9C0I1 747 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ST6GALNAC4Q9H4F1 302 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 SIX4Q9UIU6 781 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 MMP17Q9ULZ9 603 aa10.69□□□□□ -0.7
PHGDH-222ENST00000641587 CTNND2Q9UQB3 1225 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms