RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FDX1P10109 184 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 BAATQ14032 418 aaPredicted RBP15.18■□□□□ 0.02
VPS36-207ENST00000611132 KBTBD12Q3ZCT8 623 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 EFHC2Q5JST6 749 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 STRIP1Q5VSL9 837 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 TTC33Q6PID6 262 aaPredicted RBP15.18■□□□□ 0.02
VPS36-207ENST00000611132 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 RDM1Q8NG50 284 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 LGALS13Q9UHV8 139 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ARHGEF37A1IGU5 675 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ALOX15BO15296 676 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 UPP2O95045 317 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ESRRBO95718 433 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 PROCP04070 461 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 TAL1P17542 331 aaPredicted RBP15.18■□□□□ 0.02
VPS36-207ENST00000611132 GPR141Q7Z602 305 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 OR6Y1Q8NGX8 325 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 MEIS2O14770 477 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 C4orf19Q8IY42 314 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 GCNAQ96QF7 691 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 PCDHB18PQ96TA0 734 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 SIKE1Q9BRV8 207 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ALLCQ8N6M5 410 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 DDHD1Q8NEL9 900 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 CYGBQ8WWM9 190 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ZNF669Q96BR6 464 aaPredicted RBP15.18■□□□□ 0.02
VPS36-207ENST00000611132 NDNQ99608 321 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 ACSS3Q9H6R3 686 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 EML4Q9HC35 981 aaKnown RBP15.18■□□□□ 0.02
VPS36-207ENST00000611132 FBXO28Q9NVF7 368 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 CLIC5Q9NZA1 410 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 SORCS3Q9UPU3 1222 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 CHKBQ9Y259 395 aa15.18■□□□□ 0.02
VPS36-207ENST00000611132 CYP3A4P08684 503 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 PHKA2P46019 1235 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 YWHAHQ04917 246 aaPredicted RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 STILQ15468 1287 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 EMC1Q8N766 993 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 FHDC1Q9C0D6 1143 aaPredicted RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 ZC3H4Q9UPT8 1303 aaKnown RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 SERPINE1P05121 402 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 SLC1A6P48664 564 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 STX5Q13190 355 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 SLC1A5Q15758 541 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 UGP2Q16851 508 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 VSTM1Q6UX27 236 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 B3GNT6Q6ZMB0 384 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 PCYOX1LQ8NBM8 494 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 ZC3H15Q8WU90 426 aaKnown RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 IKZF4Q9H2S9 585 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 SRP72O76094 671 aaKnown RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 IL1R1P14778 569 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 PSMD7P51665 324 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 CHN2P52757 468 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 PLOD1Q02809 727 aaPredicted RBP15.17■□□□□ 0.02
VPS36-207ENST00000611132 ZCCHC23Q6ZST2 131 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 DHDDSQ86SQ9 333 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 CCNJLQ8IV13 435 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 ZNF786Q8N393 782 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 FAM210AQ96ND0 272 aa15.17■□□□□ 0.02
VPS36-207ENST00000611132 ANGPT2O15123 496 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 E2F6O75461 281 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 CPA3P15088 417 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 BST1Q10588 318 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 KCTD2Q14681 263 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 GRIK5Q16478 980 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 SEZ6Q53EL9 994 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 C12orf50Q8NA57 414 aaPredicted RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 KYQ8NBH2 561 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 SLITRK1Q96PX8 696 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 CGRRF1Q99675 332 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 FSD1LQ9BXM9 530 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 USP18Q9UMW8 372 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 AP4S1Q9Y587 144 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 F8VP50 259 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 MAFGO15525 162 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 PIAS1O75925 651 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 ATP13A4Q4VNC1 1196 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 KHDC1Q4VXA5 237 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 N4BP2L1Q5TBK1 243 aaPredicted RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 ZNF570Q96NI8 536 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 NAT9Q9BTE0 207 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 LRRC4CQ9HCJ2 640 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 POLLQ9UGP5 575 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 R3HDM2Q9Y2K5 976 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 RPS6KL1Q9Y6S9 549 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 SH3BP5O60239 455 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 CALCAP01258 141 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 GLRA2P23416 452 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 MAMLD1Q13495 774 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 DCTN2Q13561 401 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 RWDD4Q6NW29 188 aaKnown RBP15.16■□□□□ 0.02
VPS36-207ENST00000611132 LPCAT2Q7L5N7 544 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 ULK2Q8IYT8 1036 aa15.16■□□□□ 0.02
VPS36-207ENST00000611132 UBA3Q8TBC4 463 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms