RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 CRLF3Q8IUI8 442 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 FAM178BQ8IXR5 827 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 CRYGNQ8WXF5 182 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 E2F7Q96AV8 911 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 SNCAIPQ9Y6H5 919 aa13.67□□□□□ -0.22
DNMT1-207ENST00000586588 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 MEI4A8MW99 385 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 ACAT1P24752 427 aaKnown RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 KLRK1P26718 216 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 COPAP53621 1224 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 NAA20P61599 178 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 TMEM110Q86TL2 294 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 KCNN1Q92952 543 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 TMEM117Q9H0C3 514 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 STN1Q9H668 368 aaKnown RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 SIRPGQ9P1W8 387 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 CCDC162PA2VCL2 907 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 FBP2O00757 339 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 ZNF23P17027 643 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 PHKA2P46019 1235 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 GCLMP48507 274 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 ZNF543Q08ER8 600 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 RILPQ96NA2 401 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 KLC2Q9H0B6 622 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 GPCPD1Q9NPB8 672 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 KIAA1522Q9P206 1035 aaPredicted RBP13.66□□□□□ -0.22
DNMT1-207ENST00000586588 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 PLIN4Q96Q06 1357 aa13.66□□□□□ -0.22
DNMT1-207ENST00000586588 ETS1P14921 441 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 EPHB1P54762 984 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 PTK7Q13308 1070 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 UBAP2LQ14157 1087 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 NFIXQ14938 502 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 TEX44Q53QW1 395 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 RALGPS1Q5JS13 557 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 RARS2Q5T160 578 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 PPM1KQ8N3J5 372 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 STRA6Q9BX79 667 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 MTMR4Q9NYA4 1195 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 APPL1Q9UKG1 709 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 DDX60LQ5H9U9 1706 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 FAM189A1O60320 539 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 ITGAVP06756 1048 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 UNGP13051 313 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 ZNF12P17014 697 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 CYP4A11Q02928 519 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 NFX1Q12986 1120 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 AP3B2Q13367 1082 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 PRR16Q569H4 304 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 TRAPPC3LQ5T215 181 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 TICAM1Q8IUC6 712 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 MAPKAPK5Q8IW41 473 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 PALM2Q8IXS6 379 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 FBXW8Q8N3Y1 598 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 ADCY4Q8NFM4 1077 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 NKD2Q969F2 451 aaPredicted RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 SRPK1Q96SB4 655 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 EIF2AK1Q9BQI3 630 aaKnown RBP13.65□□□□□ -0.22
DNMT1-207ENST00000586588 TRPV5Q9NQA5 729 aa13.65□□□□□ -0.22
DNMT1-207ENST00000586588 USP17L15C9J2P7 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L13C9JLJ4 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L11C9JVI0 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L18D6R9N7 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L22D6RA61 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L17D6RBQ6 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L19D6RCP7 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L20D6RJB6 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 COPEO14579 308 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 SNNO75324 88 aaPredicted RBP13.65□□□□□ -0.23
DNMT1-207ENST00000586588 BANF1O75531 89 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.23
DNMT1-207ENST00000586588 RBP3P10745 1247 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 THRAP10827 490 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 ALDH3B2P48448 385 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 TAS2R40P59535 323 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L24Q0WX57 530 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 TGFBIQ15582 683 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 OASLQ15646 514 aaKnown RBP13.65□□□□□ -0.23
DNMT1-207ENST00000586588 ZNF423Q2M1K9 1284 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 IYDQ6PHW0 289 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 USP17L6PQ6QN14 398 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 PPIL6Q8IXY8 311 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 SLC44A1Q8WWI5 657 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 LENG9Q96B70 501 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 CNBD2Q96M20 576 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 TSPAN18Q96SJ8 248 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 PCDHGB4Q9UN71 923 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 PCDHGB5Q9Y5G0 923 aa13.65□□□□□ -0.23
DNMT1-207ENST00000586588 IKBKGQ9Y6K9 419 aa13.65□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms