RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ATL2Q8NHH9 583 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 DDX1Q92499 740 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 ART4Q93070 314 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 TRIM11Q96F44 468 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 THOC1Q96FV9 657 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 CDHR1Q96JP9 859 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 JPH2Q9BR39 696 aaPredicted RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 HERPUD2Q9BSE4 406 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 TXLNGYQ9BZA5 131 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 ACTR5Q9H9F9 607 aaPredicted RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 MRPL47Q9HD33 250 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 SLC40A1Q9NP59 571 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 ZNF302Q9NR11 478 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 FGFR1OP2Q9NVK5 253 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 NKIRAS1Q9NYS0 192 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 PIM2Q9P1W9 311 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 BAIAP2L1Q9UHR4 511 aa5.65□□□□□ -1.51
VAPA-203ENST00000577539 CNOT7Q9UIV1 285 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.65□□□□□ -1.51
VAPA-203ENST00000577539 LRRD1A4D1F6 860 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 DNM1LO00429 736 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 FSCN2O14926 492 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MTA2O94776 668 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 B3GALT4O96024 378 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 COL6A1P12109 1028 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 KCNA2P16389 499 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ITIH2P19823 946 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 GTF2H1P32780 548 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TFAMQ00059 246 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 CNTN2Q02246 1040 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MTM1Q13496 603 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TRPC3Q13507 836 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CUL2Q13617 745 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TRMT10CQ7L0Y3 403 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 CDR2LQ86X02 465 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 THNSL2Q86YJ6 484 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 OR5B17Q8NGF7 314 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ASAP3Q8TDY4 903 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TCP11Q8WWU5 503 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 PSPC1Q8WXF1 523 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 FAM81BQ96LP2 452 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ARPC5LQ9BPX5 153 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TEX13BQ9BXU2 312 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 DCLK3Q9C098 648 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 LRRC19Q9H756 370 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ACAD9Q9H845 621 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 VPS37BQ9H9H4 285 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 C17orf75Q9HAS0 396 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 KIAA1586Q9HCI6 787 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CD248Q9HCU0 757 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SAYSD1Q9NPB0 183 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 A1CFQ9NQ94 594 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 KLC4Q9NSK0 619 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 UMODL1Q5DID0 1318 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MROH7Q68CQ1 1323 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 COL11A2P13942 1736 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 QSER1Q2KHR3 1735 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 NRXN2Q9P2S2 1712 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 PROSCO94903 275 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 KRT19P08727 400 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CLTAP09496 248 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ATP5DP30049 168 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MAN1A1P33908 653 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SLC1A1P43005 524 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MMP13P45452 471 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 E2F5Q15329 346 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SIX1Q15475 284 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 ZACNQ401N2 412 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ANKRD20A8PQ5CZ79 823 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SYCP2LQ5T4T6 812 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 DNAJC24Q6P3W2 148 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 KCNV1Q6PIU1 500 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TBC1D1Q86TI0 1168 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 EXOC3L1Q86VI1 746 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 THNSL1Q8IYQ7 743 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CCDC89Q8N998 374 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 RDM1Q8NG50 284 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TEPSINQ96N21 525 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MTFR1LQ9H019 292 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SYNCQ9H7C4 482 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ARNT2Q9HBZ2 717 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 POLMQ9NP87 494 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 NXF1Q9UBU9 619 aaKnown RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 COL2A1P02458 1487 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 CCT8L1PA6NM43 557 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SRRM3A6NNA2 597 aaPredicted RBP5.64□□□□□ -1.51
VAPA-203ENST00000577539 B2RBV5 119 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 GOLGA8MH3BSY2 632 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 GRIN3BO60391 1043 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TTC4O95801 387 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 WEE2P0C1S8 567 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 SUPT20HL2P0C7V6 817 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 ZSCAN5DPP0CG00 497 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 MYBL1P10243 752 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 KRT15P19012 456 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 CCINQ13939 588 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 TMEM132BQ14DG7 1078 aa5.64□□□□□ -1.51
VAPA-203ENST00000577539 STXBP2Q15833 593 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms