RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DNAH14Q0VDD8 3507 aa6.32□□□□□ -1.4
SF3B3-214ENST00000572365 RFX7Q2KHR2 1363 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 FANCIQ9NVI1 1328 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 PTPRSQ13332 1948 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 PLXNA3P51805 1871 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 COL4A6Q14031 1691 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 SLC16A6O15403 523 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 DCXO43602 365 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 B3GALT2O43825 422 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 LPXNO60711 386 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 UBXN7O94888 489 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ZBED1O96006 694 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 GASTP01350 101 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 HOXC6P09630 235 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ALADP13716 330 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 SLC5A1P13866 664 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 RHCEP18577 417 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ADSLP30566 484 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CCNA1P78396 465 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CDC42EP1Q00587 391 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 RHDQ02161 417 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 MECOMQ03112 1051 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 TAP1Q03518 808 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 HGFACQ04756 655 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 TCF15Q12870 199 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ZMAT1Q5H9K5 638 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 THEMIS2Q5TEJ8 643 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CATSPERGQ6ZRH7 1159 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ANKRD33Q7Z3H0 272 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 MAPKAPK5Q8IW41 473 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 RHOT1Q8IXI2 618 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 LILRA3Q8N6C8 439 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 TP53I13Q8NBR0 393 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 OR7D4Q8NG98 312 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 SH3RF3Q8TEJ3 882 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CYFIP2Q96F07 1278 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 LCORQ96JN0 433 aaPredicted RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 TRPV6Q9H1D0 765 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 DNAJC18Q9H819 358 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 MANSC1Q9H8J5 431 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 TLR9Q9NR96 1032 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 ING3Q9NXR8 418 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 FAM184BQ9ULE4 1060 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
SF3B3-214ENST00000572365 EPG5Q9HCE0 2579 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CACNA1HO95180 2353 aa6.31□□□□□ -1.4
SF3B3-214ENST00000572365 CACNA1FO60840 1977 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 MED19A0JLT2 244 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 C19orf81C9J6K1 198 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TPP1O14773 563 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ADCY6O43306 1168 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TOX4O94842 621 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 GH2P01242 217 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 MYBP10242 640 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 CRHR1P34998 444 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 CDK7P50613 346 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ADCY7P51828 1080 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 AGFG1P52594 562 aaKnown RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 RRADP55042 308 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TIMM10P62072 90 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 BEX3Q00994 111 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 NFYCQ13952 458 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 WDR43Q15061 677 aaKnown RBP eCLIP6.3□□□□□ -1.47e-6■■□□□ 14.2
SF3B3-214ENST00000572365 PUM3Q15397 648 aaKnown RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 GAGE13Q4V321 117 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF648Q5T619 568 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 OGFOD2Q6N063 350 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 PSRC1Q6PGN9 363 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 USP30Q70CQ3 517 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ASCL5Q7RTU5 278 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 GPR155Q7Z3F1 870 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 RALYLQ86SE5 291 aaKnown RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 DRC7Q8IY82 874 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TEX11Q8IYF3 940 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ANKRD44Q8N8A2 993 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 ATOH1Q92858 354 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 RGMAQ96B86 450 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 SLC39A13Q96H72 371 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 TOX2Q96NM4 488 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 CGRRF1Q99675 332 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 SLC6A15Q9H2J7 730 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 RPAP3Q9H6T3 665 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 UBE2ZQ9H832 354 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 JADE2Q9NQC1 790 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 KMT5AQ9NQR1 393 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 MUTYHQ9UIF7 546 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 RNF114Q9Y508 228 aa6.3□□□□□ -1.4
SF3B3-214ENST00000572365 COL4A4P53420 1690 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-214ENST00000572365 GAKO14976 1311 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ZNF521Q96K83 1311 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 MYH1P12882 1939 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ANO9A1A5B4 782 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 JUNP05412 331 aaKnown RBP6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ASGR1P07306 291 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 ASNSP08243 561 aa6.29□□□□□ -1.4
SF3B3-214ENST00000572365 VSIG10L2P0DP72 767 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 205.4 ms