RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 LSM14BQ9BX40 385 aaKnown RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 RPAP3Q9H6T3 665 aaPredicted RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 SLC5A4Q9NY91 659 aa5.6□□□□□ -1.51
KARSP3-201ENST00000571212 HOXC10Q9NYD6 342 aa5.6□□□□□ -1.51
KARSP3-201ENST00000571212 USP36Q9P275 1121 aaKnown RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 EVLQ9UI08 416 aaPredicted RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 ATP11BQ9Y2G3 1177 aa5.6□□□□□ -1.51
KARSP3-201ENST00000571212 UNC80Q8N2C7 3258 aa5.6□□□□□ -1.51
KARSP3-201ENST00000571212 NCOR1O75376 2440 aa5.6□□□□□ -1.51
KARSP3-201ENST00000571212 COL11A1P12107 1806 aaPredicted RBP5.6□□□□□ -1.51
KARSP3-201ENST00000571212 EPB41L2O43491 1005 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 IDH1O75874 414 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 SCAF4O95104 1147 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 HSD3B2P26439 372 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 ZFP36P26651 326 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 ADORA2AP29274 412 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 LSP1P33241 339 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 GUCY1A2P33402 732 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 SHMT1P34896 483 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 PPARAQ07869 468 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 TRIM25Q14258 630 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 TRIM60Q495X7 471 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 PLEKHG4Q58EX7 1191 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 C9orf50Q5SZB4 431 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 SLC9C2Q5TAH2 1124 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 NAIF1Q69YI7 327 aaPredicted RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 LAIR1Q6GTX8 287 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 TAS1R1Q7RTX1 841 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 ABRAQ8N0Z2 381 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 MAGEB6Q8N7X4 407 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 MIGA1Q8NAN2 632 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 BADQ92934 168 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 SPATC1LQ9H0A9 340 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 PUS7LQ9H0K6 701 aaKnown RBP5.59□□□□□ -1.51
KARSP3-201ENST00000571212 MROH8Q9H579 483 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 HELLSQ9NRZ9 838 aa5.59□□□□□ -1.51
KARSP3-201ENST00000571212 A0A1W2PR48 441 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 TRIM43BA6NCK2 446 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 RNF113AO15541 343 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 DNAJC6O75061 913 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 NCLP19338 710 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 CHMLP26374 656 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PTGS2P35354 604 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PLCD1P51178 756 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 MANFP55145 182 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PHC1P78364 1004 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 GABPAQ06546 454 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 SEPT2Q15019 361 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 LRRC41Q15345 812 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 GPR158Q5T848 1215 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 BROXQ5VW32 411 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 MBNL2Q5VZF2 373 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 ZSCAN25Q6NSZ9 544 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PPM1KQ8N3J5 372 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 GPR150Q8NGU9 434 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 TRIM43Q96BQ3 446 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 IL17RAQ96F46 866 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 STRBPQ96SI9 672 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 IL25Q9H293 177 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 TTYH1Q9H313 450 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 EMC7Q9NPA0 242 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 NRBP1Q9UHY1 535 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PRSS50Q9UI38 385 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 LAMA2P24043 3122 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 ZNF532Q9HCE3 1301 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 BAZ2AQ9UIF9 1905 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 A0A1W2PRG0 241 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 HIP1O00291 1037 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 NRP1O14786 923 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 KIAA0355O15063 1070 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 KDM1AO60341 852 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 SLC25A27O95847 323 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 FCER1AP12319 257 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 FOSL2P15408 326 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 XPAP23025 273 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 APOBEC3AP31941 199 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 LSSP48449 732 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 TLE2Q04725 743 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 DUSP2Q05923 314 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 MRPL49Q13405 166 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 ALX1Q15699 326 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 MCMDC2Q4G0Z9 681 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 ANO1Q5XXA6 986 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 CCDC62Q6P9F0 684 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 TMEM179Q6ZVK1 233 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 RHOUQ7L0Q8 258 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 SLC41A1Q8IVJ1 513 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 OR52N2Q8NGI0 321 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 OR2W6PQ8NHA6 318 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 MFSD3Q96ES6 412 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 PRRX2Q99811 253 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 CRNKL1Q9BZJ0 848 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 EIF2B4Q9UI10 523 aaKnown RBP5.58□□□□□ -1.52
KARSP3-201ENST00000571212 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
KARSP3-201ENST00000571212 NUMBLQ9Y6R0 609 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms